KEGG   Populus nigra (Lombardy poplar): 133679983
Entry
133679983         CDS       T10372                                 
Name
(RefSeq) AP-2 complex subunit alpha-1-like
  KO
K11824  AP-2 complex subunit alpha
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04142  Lysosome biogenesis
pnz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133679983
   04142 Lysosome biogenesis
    133679983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133679983
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133679983
Membrane trafficking [BR:pnz04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    133679983
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133679983
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 HEAT_2 RRN3
Other DBs
NCBI-GeneID: 133679983
NCBI-ProteinID: XP_061958734
Position
19:complement(12621450..12632645)
AA seq 1020 aa
MALSGMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKGLTPYEKKKYVWKMLY
IFMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRN
ETFQCLALTMVGNIGGREFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLYRKNPDVVN
VDGWSDRMAQLLDERDLGVLTSCMSLLVALVSNNHEAYWSCVPKCVKTLERLARNQDIPQ
EYTYYGIPSPWLQVKTMRALQYYPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVHDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTADFAMREELSLKAA
ILAEKFFPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAAAKAREYLDK
PAIHETMVKVSAYLLGEYSHLLARRPGCSPKEIFSVIHEKLPTVSTTTIPILLSTYAKIL
MHTQPPDPELQKHVWAIFNKYESCIDVEIQQRAIEYFALSRKGAALMDILAEMPKFPERQ
SALIKKAEVAEVDTAEQSAIKLRAQQHMSNALVVTDQQPSNGTPQSVGQLSLVKIPSMSG
DEHTSAVQELSQANGTLATVDPQSPSADLLGDLLGPLAIEGPPGAAVQYEPNAVSGLEGV
PIPADDAAAIVPVGKETNSVQPIGNINERFYALCLKDSGVLYEDPNIQIGIKAEWRAQHG
RLVLFLGNKNTSPLLSVRAQILPPAHLKIELSLVPETIPPRAQVQCPLEIMNLHPSRDVA
VLDFSYKFGTNMANVKLRLPAVLNKFLQPITVSTDEFFPQWRSLSGPPLKLQEVVRGVRP
LSLIDMANIFTSSRLAVCPGLDPNPNNLIASTTFYSESIRPMLCLIRIETDPADRTQLRM
TVASGDPTLTFELKEFIKEQLVSIPTAPPPPAPAPPAAPVAQPTNPAALTDPGALLAGLL
NT seq 3063 nt   +upstreamnt  +downstreamnt
atggcgttatcaggcatgagaggactctctgtctttataagcgatattcgaaattgtcaa
aacaaagagcaagaaagacttcgcgttgataaagagcttggcaatatccgtactcgcttc
aaaaacgaaaagggcttgactccttatgaaaagaagaaatatgtttggaaaatgctttac
attttcatgctaggctacgatgttgattttggtcacatggaagctgtttccttaatatcc
gcaccaaagtaccctgaaaagcaggttggatacatagtgacatcatctttgctaaatgag
aaccatgattttctcagattagcaataaatacagtgcgcaatgatattattggtcggaat
gaaacttttcagtgcctggctttgactatggttggaaatattggtgggagagaatttgct
gaatcattggcaccagatgttcaaaagttactaatttctagtagctgcagaccacttgtg
agaaagaaggctgcattatgtttgctgcgcttgtacagaaaaaatccagatgttgtcaat
gtagatggctggtcagatcggatggcacagctgttagatgaacgtgatcttggtgttttg
acgtcttgtatgagtcttcttgttgctttagtgtcaaataaccatgaagcgtattggagt
tgtgtaccgaaatgtgttaagacactggagcgacttgctaggaaccaggatattccacaa
gaatacacttattatggtattccatctccttggcttcaggttaagacaatgagggctctt
cagtactatccgactattgaagatcctaatactagaagatccttgtttgaggtcttacag
aggatactaatgggaactgatgttgtaaaaaatgtaaataagaacaacgcatcgcatgct
gttctctttgaagcccttgctcttgtaatgcaccttgatgctgaaaaagagatgatgtct
cagtgtgttgccctccttggcaaatttattgccgttcgtgaaccaaatatccgttatctt
ggcctggagaatatgactcggatgttgatggttacagacgtgcatgatatcattaaaaga
catcaggctcagatcatcacctcattgaaagatcctgacatcagtatccgtcggcgtgct
cttgatttgctttatggtatgtgtgatgtttcaaatgcaaaggacatagtggaagaacta
ttgcagtatcttagcacagcagattttgcaatgcgtgaggagttgtctcttaaagctgct
attcttgcagaaaagttttttcctgatttgtcttggtacgtggatgtgatccttcaattg
attgacaaggcaggagattttgtcagcgatgatatatggtttcgtgttgtgcagtttgtt
acaaacaatgaagacctacagccttatgcagcagcaaaggccagagagtatcttgacaag
cctgccatacatgagacaatggtcaaggtcagtgcatatctccttggagagtacagccac
cttttggccagacggcctgggtgtagtccgaaggaaatttttagtgtcatacatgagaag
cttcctactgtatcaactactaccattccaattcttctttccacgtatgctaagatctta
atgcacactcaaccccctgacccagaactacagaaacatgtctgggcaatatttaacaaa
tacgagagttgcattgatgttgagatacaacagcgagcaattgagtattttgcattaagt
aggaaaggtgcagctctaatggacatattggctgaaatgcctaaattccctgagcgtcag
tctgcattgattaaaaaagctgaggttgctgaagtagatactgcagagcaaagtgcaatt
aagttgcgggcgcagcagcatatgtctaatgctttggttgtaacagaccaacaaccttcg
aatgggacccctcaatctgttggccagcttagtctagtaaagattcccagcatgagtggc
gatgagcatacttcagcagttcaagaattgtcccaggcaaatgggactttggctacagta
gatcctcaatctccttcagcagatctcctaggtgatctcttgggtccactggcaattgag
ggccctcctggagctgctgtccaatatgagccaaatgcagtttctggactggaaggggtt
ccaattccagcggatgatgcagcagctattgtacctgtaggaaaggaaactaattctgtc
cagccaattggaaatatcaatgaaaggttttatgctttatgcttgaaggatagtggtgtt
ttatatgaggatccaaacattcagattggtattaaagcagagtggcgagctcagcatgga
cgtcttgtccttttcttgggaaacaaaaacacttctccacttctttctgttcgggctcag
atattaccccctgcccatttaaaaattgaactctcattggtacctgaaacaattcctcca
cgggcacaggtgcaatgcccgcttgaaataatgaatctccatccaagcagggatgttgct
gttcttgacttctcgtacaagtttggtacaaacatggccaatgtcaagcttcgccttcca
gctgttctgaacaaatttcttcagcctattacagtgtctactgatgagtttttccctcag
tggagatcactttcagggccaccactgaagcttcaagaagttgttagaggtgtaagacca
ttgtctctcattgacatggcaaacatatttaccagttctcggttggcagtttgtccaggg
cttgacccaaaccccaataacctgattgcaagtactaccttctactcagagagcatccgg
cccatgctttgcttgattagaattgaaacagatcccgcagaccgaacacagttgcggatg
acagttgcctcaggggacccaacactaacatttgagctgaaggagtttatcaaagaacaa
ttagttagtattccaacagcaccgcctccacctgcaccagcaccaccagctgctccagta
gctcaaccaaccaatcctgcagctttgacggatcctggagctctgctggctggtttgctg
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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