KEGG   Populus nigra (Lombardy poplar): 133682501
Entry
133682501         CDS       T10372                                 
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
  KO
K03265  peptide chain release factor subunit 1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133682501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133682501
   03012 Translation factors [BR:pnz03012]
    133682501
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     133682501
Translation factors [BR:pnz03012]
 Eukaryotic type
  Release factors
   133682501
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 acVLRF1 baeRF_family10 Ribosomal_L7Ae She2p M157_N_1
Other DBs
NCBI-GeneID: 133682501
NCBI-ProteinID: XP_061961840
Position
2:39380532..39384773
AA seq 436 aa
MADGHESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDINRYTLKNSATGEIIIKHLNKDQEADQNNFRD
SATAAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDELSDGEVYEDSD
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggctgatggtcatgagtcagacaagaatattgagatatggaaaatcaaaaagttgatt
aaggcactggagtctgcaaggggtaatggcacgagcatgatatctcttataatgcctcct
cgtgatcaaatatctcgggtcacaaagatgttaggtgatgaatttggaactgcttcaaac
attaaaagtagggtcaaccgccaatctgtcttgggtgccatcacatctgctcagcagagg
ctgaagctttataacaaggttccgccgaatgggctggtgctttatacgggaacaattgtt
actgaagatggaaaagagaagaaggttacaattgattttgaacctttcaaacccataaac
gcatcattgtacctctgtgacaacaagtttcacacagaagcactcaatgagctcttagag
tctgatgacaagtttggttttattgtcatggatgggaacggcaccttatttgggacactg
agtggaaacacacgagaagtgctccataaatttactgttgatttgccaaagaagcacgga
agaggagggcagtctgctctgcggtttgctcgacttcggatggaaaaacggcacaactat
gtgaggaaaactgcagagcttgccacccagttcttcattaatcctgctaccagtcagccc
aatgttgctgggttgatactagctggttcagctgacttcaagactgagctcagccagtca
gatatgtttgacccaaggttgcaagccaagatattgaacgtggttgatgtttcatatggt
ggagaaaatggtttcaaccaagctattgagctgtcagctgagattctatcaaatgtgaag
tttatacaggaaaaacgtttgatagggaaatactttgaggagatcagccaggatactggg
aagtatgtctttggtgttgatgatacattgaaggctctggaaatgggtgctgtcgaaatc
cttatcgtgtgggaaaatctagatatcaataggtacacgctgaaaaacagtgctacagga
gaaattatcataaagcacttgaacaaggaccaagaggctgatcagaataactttcgggat
tcagccactgctgcagagttggaggttcaggagaagatgcccttgcttgagtggtttgcc
aatgagtacaagcgatttggttgtacacttgaattcgtcaccaataaatcacaagaggga
tcgcagttttgcagggggtttggtggaattggtggtattcttcgctaccagcttgacatg
cgatcatttgatgaattgtccgatggagaagtttatgaggattccgattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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