KEGG   Populus nigra (Lombardy poplar): 133698016
Entry
133698016         CDS       T10372                                 
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133698016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133698016
Enzymes [BR:pnz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     133698016
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     133698016
 Prokaryotic type
     133698016
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 133698016
NCBI-ProteinID: XP_061976858
Position
6:5581502..5585708
AA seq 311 aa
MAASSKTIMDFLQPAKRLKLSSSSPSPTDPLNLLNKSLSAKSTSTDLTPDQVSRIELNKL
RAKSKRNLKLCSQLVSNSKGSSGHVNLEELLVEDTWREVLPGELEKPYFKNLCKFVESEI
SNGIVAIYPPQHLIFNALNSTPFNTLKAVIIGQDPYHGPGQAMGLSFSVPQGVKAPSSLV
NIFKELKQDLGCSIPSHGNLEKWAIQGVLLLNTVLTVRNHQANSHSKKGWEHFTDAVIKT
ISQKKEGVVFLLWGNSAQEKSKLIDQTKHHILKAAHPSGLSANRGFFGCRHFSRTNQLLA
QMGISPIEWQL
NT seq 936 nt   +upstreamnt  +downstreamnt
atggctgcctcttccaaaacaataatggatttcctccaacccgccaagcgccttaaactc
tcttcctcctctccttccccaacagaccccttaaatctcttaaacaaatcactctctgca
aaatcaacctccaccgacctcactcctgaccaagtatcccgcatcgaactcaacaaacta
cgcgccaaatccaaacgcaacctcaaactatgttctcaactagtctccaattccaaaggt
tcctccgggcatgtgaatttagaggaactgttggtggaggacacgtggcgagaggtgctg
ccaggggagttggaaaagccgtattttaagaatctgtgtaaatttgtggaaagtgagatt
agtaacgggattgtagctatatacccaccgcagcacttgattttcaatgccttgaattcg
acaccttttaatacgctcaaggctgttatcatcggacaggatccttatcatggccctggt
caggcaatggggctttctttttctgtgcctcaaggggttaaggcaccttctagtcttgtt
aatattttcaaggaacttaagcaggatctggggtgttccattccgtctcatgggaatctt
gaaaaatgggctattcagggtgttctattgctcaacacagttctcactgttaggaatcac
caagcgaattctcattcaaagaaaggatgggagcatttcactgatgctgttatcaaaaca
atttcacagaagaaggaaggagttgtttttcttctttggggtaactcagctcaggagaaa
tccaagttaattgaccagacaaagcatcacattctgaaggctgcacatccttctggcttg
tctgcaaacagaggcttctttggctgcaggcatttttctcgcacaaatcagcttttggcg
caaatgggaatttccccaatagaatggcaactttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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