KEGG T07387: KZX46

Polymorphobacter sp. PAMC 29334: KZX46_09035

Entry

KZX46_09035       CDS       T07387

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

poq Polymorphobacter sp. PAMC 29334

Brite

KEGG Orthology (KO) [BR:poq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:poq03032]
    KZX46_09035 (gyrB)
   03400 DNA repair and recombination proteins [BR:poq03400]
    KZX46_09035 (gyrB)
Enzymes [BR:poq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     KZX46_09035 (gyrB)
DNA replication proteins [BR:poq03032]
Prokaryotic type
  DNA Topoisomerases
   KZX46_09035 (gyrB)
DNA repair and recombination proteins [BR:poq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KZX46_09035 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook

Other DBs

NCBI-ProteinID:

QYE36757

Position

1080606..1082999

AA seq 797 aa
MAEADYGADSIQVLRGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGYCDRI
DIRLNADGSVTVADNGRGIPTGIHSEEGVSAAELVMTQLHAGGKFNNSDENAYKVSGGLH
GVGVSVVNALSEYLILRIWREGHEHSMTFKNGDPQAPLAIVGPQGDRRGTEVTFLPSPVT
FKIVEFDFAKLEHRFRELAFLNSGVRLFLTDARHAEHVTTELYYEGGIAAFVAYLDKSKT
SLIPAPVAIHGERDDISIDVALEWNDSYYEQVLCFTNNIPQRDGGTHLAAFRAALTRTLN
TYAEKSGVLKKEKVTLTGDDMREGLTAIISVKLPDPKFSSQTKDKLVSSEVRQPLEALIA
DKLAEWLEENPNHAKTIISKIIDAAAAREAAKKARDLTRRKGALDIASLPGKLADCQERD
PAKSELFLVEGDSAGGSAKQGRNRAYQAILPLRGKILNVERARFDRMLSSREIGTMIQAL
GCGIGRDEFKIEKLRYHKVVIMTDADVDGAHIRTLLLTFFYRQMPELIHGGYLYIAQPPL
YKVSRGRSEVYLKDNPALDDYLVDSGLNGLLLETSSGERRGGDDLRALTEHARRLKTLMT
YVPQRYDPRVIEALALTGGLAPDLDRAGLAAAASRTAAWLDLTDDVQGWVAEPAVDGGYH
LSRALRGVTDHYIVDPALLASAEARKLHALGSEEAATYAAPAKLGERIVRRPSELLDAVL
DAGRKGLSIQRYKGLGEMNAEQLWETTLDPQARALLRVTADDLEGANLTFETLMGEVVEP
RRAFIQDNALSVANLDV

NT seq 2394 nt +upstreamnt +downstreamnt
atggccgaggccgattacggcgcggattcgatccaggtcctccgcggtctcgacgcagtc
cgcaagcgacccggcatgtacatcggcgataccgacgacggctcgggcctccaccatatg
gtcttcgaagtcagcgacaatgcgatcgacgaagccctcgccggctattgcgaccggatc
gacattcgcctcaacgccgacggcagcgtcaccgtcgccgacaacggccgtggcatcccg
accggcatccactccgaagaaggcgtcagcgccgccgaactcgtgatgacccagctccac
gcgggcggcaagttcaacaattcggacgagaacgcgtacaaggtttcgggcggccttcac
ggcgtcggcgtcagcgtcgtcaatgccttgtccgaatatctcatcctccgcatctggcgc
gagggccacgagcacagcatgacgttcaagaacggcgacccgcaggcgccgctcgcaatc
gtcgggccgcaaggcgaccgccgcggcaccgaggtgaccttcctgccgtcgcccgtcacc
ttcaagatcgtcgagttcgacttcgccaagctagagcaccgcttccgcgaactcgccttc
ctcaactcgggcgtccggctgttcctgaccgacgcgcgccacgccgaacacgtcaccacc
gagctgtattacgagggtgggatcgccgcgttcgtcgcctatctcgacaagtcgaagacc
tcgctgatccccgcgccggtcgcgattcacggcgagcgcgacgacatttcgattgacgtc
gcgctcgaatggaacgactcgtattacgagcaggtcctttgcttcaccaacaacatcccg
cagcgtgatggcggtacccatctcgcggcgttccgcgcggcgctgacccgcaccctcaac
acgtacgccgagaagtcgggcgtgttgaagaaggagaaggtgacgctgaccggcgacgac
atgcgcgaagggctgaccgcgatcatctcggtcaagctgcccgaccccaagttcagcagc
cagactaaggacaagctcgtcagctccgaagtccgccagccgctcgaagcgctgatcgcc
gacaagcttgccgagtggctcgaggaaaaccccaaccacgccaagacgatcatctcgaag
atcatcgacgccgccgccgcgcgcgaagccgcgaagaaggcgcgcgacttgactcggcgc
aagggcgcgctcgacatcgcctcactgcccggcaagctcgccgactgccaggagcgcgac
cccgccaagtccgagctgttcctcgtcgagggtgactcggcgggcggctcggcgaagcag
gggcgcaaccgtgcgtatcaggcgattctgccgttgcgcggcaagatcctcaacgtcgag
cgcgcgcgcttcgaccggatgctgtcgagccgcgagatcgggacgatgatccaggcgctc
ggctgcggcatcggccgcgatgagttcaagatcgagaaactgcgctatcacaaggtcgtc
atcatgaccgacgccgacgtcgacggcgcgcatatccggacgctgctgctgacgttcttc
taccgccagatgcccgagctgatccatggcggttatctctacatcgcccagccgccgctc
tataaggtcagccgcggccggtcggaggtctatctcaaggacaatcccgcgctcgacgac
tatctcgtcgacagcggcctcaacggactgctcctcgaaacatcgagcggcgaacggcgc
ggcggtgacgacctgcgcgcgctgaccgaacacgcgcgccgcctcaagacgttgatgacc
tatgtcccgcagcgctacgacccgcgcgttatcgaggccttggcgttgaccggcggcctc
gctcccgatctcgaccgcgccgggctcgccgccgccgcatcgcggaccgcggcatggctc
gacctgaccgacgacgtccagggctgggttgccgaacccgcagtcgacggcggttatcat
ctcagccgggcgctccgcggcgtcaccgaccattatatcgtcgatcccgcgctgctcgcc
tcggcggaggcgcgcaagctccacgccctggggtcggaggaggcggcaacctacgccgcc
ccggcaaagctcggcgagcgtatcgtccgccgcccgtccgaattgctcgacgcggtcctc
gacgccgggcgcaaggggctgagcattcagcgctacaaggggctcggcgagatgaacgct
gaacagctgtgggaaacgacgctcgacccgcaggcgcgcgcactgttgcgtgtcaccgcc
gacgacctcgaaggggcaaatctgaccttcgaaacgctcatgggggaggtcgtcgaaccg
cgtcgcgccttcatccaggacaacgccctgtcggtggcaaacctcgacgtttga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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