KEGG   Polymorphobacter sp. PAMC 29334: KZX46_13455
Entry
KZX46_13455       CDS       T07387                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
poq  Polymorphobacter sp. PAMC 29334
Pathway
poq03410  Base excision repair
poq03430  Mismatch repair
poq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:poq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KZX46_13455 (recJ)
   03430 Mismatch repair
    KZX46_13455 (recJ)
   03440 Homologous recombination
    KZX46_13455 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:poq03400]
    KZX46_13455 (recJ)
DNA repair and recombination proteins [BR:poq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     KZX46_13455 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     KZX46_13455 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KZX46_13455 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: QYE33833
Position
complement(2042212..2043984)
AA seq 590 aa
MSHVFNVTASVLGQPWQWRGGIAPGSGAAGGIDDLIEQLFRARGAAAVDLDRLRSAKLRD
WLPDPSIFRDMDAAAARIAAAIRAAEPVVVFGDYDVDGATSAALLIRLIRDCGGIASAYI
PDRLLEGYGPSPAAMVALAGTGATLIVTVDCGTQGFDALAAAKAAGVEVIVVDHHQASTA
LPPAVAVVNPNRLDETEGAAFGHLAAVGMAFIVAVAVVRTLRADGWFIDRTAPNLLDLLD
LVALGTVADVVPLTGLNRAFVAQGLKVMAARRNLGLAALSAVAGIERAPLARDLGFALGP
RINAGGRVGKSDLGVRLLTTLDPDEAATLAAELDRLNVERRAIEATVTDEAALLTDRTGN
AAVAVIASGGWHPGVIGIVASRLKDKLKRPVIVIALEAGPDGGMIGKGSGRSVPGVDLGG
AILAAKDMGLLIAGGGHAMAAGLTIDASRIDELAVFLDERLGGDVGRSSGGRALFVDAAL
SPRGVCIELTEVLDVGGPYGQGWPAPRVASGPWRVAKVDIVGDNHVRAILTGGDGARIKA
MAFRSGDTPLGLALASAAGRWCFVSGRVQRDDWGRTPAAELHLDDLAWVD
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcgcatgtcttcaacgtcaccgcctcggtcctcggacagccgtggcagtggcgtggc
ggaattgcgccgggcagcggtgcggcaggcgggatcgacgacctcatcgagcagctgttt
cgcgcacgcggcgcggcggcggtcgacctcgaccggctccgctcggcgaaactgcgcgac
tggctgcccgacccgtcgatcttccgcgacatggacgccgccgccgcgcgcatcgccgcc
gcaatccgcgccgccgaaccggtcgtggtcttcggcgattacgacgtcgacggcgcgacg
agcgcagcgctgctgatccggttgatccgcgactgcggcggcatcgccagcgcctacatc
cccgaccggctgctcgaaggttacggcccctcccccgccgcgatggtcgcgctggcagga
actggcgcgacgctgatcgtcaccgtcgattgtgggacgcaggggtttgacgcgctcgct
gccgccaaagccgccggggtcgaggtgatcgtcgtcgaccaccatcaggcgtcgaccgcg
ctgccccccgccgtcgccgtggtcaacccgaaccgcctcgacgagaccgagggcgcggcg
tttggccatctcgcggcggtcggcatggcgttcatcgtcgcggtcgcggtggtgcggacg
ttgcgcgccgacggttggttcatcgaccgcaccgcacccaacctgctcgacctgctcgat
ctcgtcgcgctcggcactgtcgccgacgtcgtcccgctgaccggactcaaccgcgctttc
gtcgcgcaggggttgaaggtcatggccgcgcggcgcaatcttggcctcgccgcgctgtcg
gcagtcgccgggatcgagcgtgcccccctcgcccgcgatctcggctttgcgctcgggccg
cggatcaatgccggggggcgggtcggcaagtccgacctcggcgtccggctgctgacgacg
ctcgaccccgacgaagccgccaccctcgccgccgaactcgaccgccttaatgtcgaacgc
cgcgcgatcgaagcgacggtgaccgacgaggcggcgctgctcaccgaccgcaccggcaac
gccgcggtcgcggtgatcgccagcggcggctggcaccccggcgtcatcggcatcgtcgcc
agtcgcctcaaggacaaactcaagcgccccgtaatcgtcatcgccctcgaggccgggccc
gacgggggcatgatcggcaagggatcggggcggtcggtacccggggtcgacctcggcggc
gcaatcctcgcagcgaaggacatggggctgctgatcgcgggcggcggccacgcgatggcg
gcggggctgacgatcgacgcgagccggatcgacgagctggcggtattcctcgacgagaga
ttgggcggcgacgtcgggcgatcgagcggaggccgagcgctcttcgtcgacgccgcgctc
agcccgcgtggggtgtgcatcgaattgaccgaagtcctcgatgttggcggaccgtacggc
cagggctggcctgcaccccgcgtcgccagcggcccgtggcgcgtcgccaaggtcgacatc
gtcggcgacaaccacgtccgcgcgatcctgaccggcggcgacggcgcgcggatcaaggcg
atggcgttccgctcgggcgacaccccgctcggcctggccctcgcgagcgccgccggacgc
tggtgcttcgtctccggccgcgtccagcgcgacgactggggccgcacccccgcggccgaa
ctccaccttgacgatctggcatgggttgactag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (4)   

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