KEGG   Panulirus ornatus (ornate spiny lobster): 139745713
Entry
139745713         CDS       T10834                                 
Symbol
Dsp1
Name
(RefSeq) high mobility group protein DSP1 isoform X1
  KO
K10802  high mobility group protein B1
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03410  Base excision repair
porn04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139745713 (Dsp1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139745713 (Dsp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:porn03036]
    139745713 (Dsp1)
   03400 DNA repair and recombination proteins [BR:porn03400]
    139745713 (Dsp1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:porn04147]
    139745713 (Dsp1)
Chromosome and associated proteins [BR:porn03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    139745713 (Dsp1)
DNA repair and recombination proteins [BR:porn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     139745713 (Dsp1)
   MMR (mismatch excision repair)
    Other MMR factors
     139745713 (Dsp1)
Exosome [BR:porn04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   139745713 (Dsp1)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5 FTCD_C
Other DBs
NCBI-GeneID: 139745713
NCBI-ProteinID: XP_071512263
Position
62:13129118..13137574
AA seq 239 aa
MNQSWFEIAFLCFLYGRTPSTRPWNLALVYPPSAIMPRAKLIDTKPRGRMSAYAFFVQTC
REEHKKKHPDENVIFSEFSRKCADRWKTMTDKEKHRFYDMAEKDKTRYDTEMRGYRGPRQ
ARATRKRRNRKDPNAPKRALSAFFWFSNDERPKVRAANPDMGVGEVAKQLGAAWSNTAPE
VRAKYEAMAENDKARYEREMKAFKEGSFGAKKLKTAVANDEEEEDESESEEEDEEEEDE
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaaccaatcatggtttgagattgccttcctatgctttctctatggaagaacgccgtcg
actcgtccgtggaacctagcgttagtgtacccaccttcagcaatcatgccacgtgccaaa
ttgatagacaccaaaccacgtgggcgaatgtctgcctatgccttttttgtacagacatgt
cgcgaggaacacaagaagaagcatcctgatgagaatgtgatcttctcagagttttctcgc
aaatgtgctgaccgttggaagacaatgactgataaagagaaacatcgcttttatgacatg
gctgagaaggacaaaactcgatatgacacagagatgcgaggttataggggacctcgccaa
gctcgggccacccgtaagaggcgtaatcgtaaggacccaaatgctcctaagagagctcta
tctgcattcttttggttctccaatgatgaaagaccaaaagtgcgtgcagccaaccctgat
atgggcgtgggagaagttgccaagcaacttggtgctgcctggagtaatactgcaccagaa
gttagagcaaaatatgaagcaatggcagaaaatgataaagccagatatgagagggaaatg
aaagctttcaaggaggggagctttggagctaaaaaactcaagactgctgttgcaaatgat
gaagaagaagaagacgaaagtgaaagtgaagaggaagacgaggaagaagaggatgaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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