KEGG   Panulirus ornatus (ornate spiny lobster): 139745932
Entry
139745932         CDS       T10834                                 
Symbol
Nup188
Name
(RefSeq) nucleoporin NUP188
  KO
K14311  nuclear pore complex protein Nup188
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139745932 (Nup188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:porn03019]
    139745932 (Nup188)
Messenger RNA biogenesis [BR:porn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     139745932 (Nup188)
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Utp13 CNOT1_HEAT_N
Other DBs
NCBI-GeneID: 139745932
NCBI-ProteinID: XP_071512723
Position
63:complement(8985177..9075833)
AA seq 1629 aa
MEDVELVSGKALWGVICGTYVLPSDEVVGAELQLASPHLRIGLAAYTKPSGDHYQTWAQT
SEATKAEKDFVKKLSQLLDLSATHSWEIFQLFLLHEYRGADASLTEVLASQRDEETFMAQ
LWSFYLGDRLHLLRCLRHIVANTANPEHPYQNLFDDFMHDVLDKDGTLGDSLVQQVQLCT
RMCPPSLQTHGSHLPSHGPHTWLAHHLAELREVLAILLVYYGSTSHSPTPDTFKKLLQLA
QGGGLGGRHEIQEGLRDSHGSLVEALDATHMLLLILAINADSPTSGHSLCDSGWVTKLDP
IMAGLGARTPHLAPLLAWAVLQLRANGGTATSSPKIYHKLAHRALHGNVFGYLQTALNNT
AIQGDELLLRLASSVVYSLVCAAAGSLDLDRMGCLPILNSLAKPCLAQVPPAHLFWAEEG
GGAGLLLPQALEVFPHDVEPLLSLTTALAQANPESCHKVIELLSELPSITWVVSGTESHS
LKVRGSECFTTAPLHLMPTVTVPAHTSGILLSASPLVVTWQMPTNAWQALLAIMKILDYE
VSSGASLPDRRLMVTVCATMQLLSSVLTTVPSQLSALVLFFQQTVGLIRRVAQVTRPSGE
LVAALLQFLAEVAAQDPKLVWAEIEGSPLLPFLAASETTGLKRGKVDPFLGYRAGGLRAL
VCGVEAANGSYPILRSYTGLLTAAIKGGVGSCSVKGGVVFMAREVTGALLRWCYKSQEER
DTVLDHCLALLHHTLEASSMDSSVRDLVVRQLVDRSSAGQTLLSVVVSGASLESALNHPT
HSPISTHARRLTRTAQMALSILHRLVGEDSSMGGLSQLLRAAPSLGVTLGGGGRSLGSSS
PPHLALTVALYSHQRLNPRLSYLALRTLTRFAQKLDVPLVACFGGEADGIRDALLLRLDS
ATEDVRVKVALLRLLTASTTRQQGLTNAFLTPPEKLLNPLTSLASLSTKNESGRELLLAV
VELLDALWSEKYTTATVYLQDKEDFWKALIHPLTTDKPGEVSDAVVGHTVSVLARQLFSS
DTKPTACLKSAMDQLCEPDTGTICLWSKHIVKSLENGSNCSKDVSRLLLPAWRDFLVVLV
ARAKSWLTNDQKVSLASDILQALLHQLEVETVDESLTVLMAELFLSQVKHCGKQLAEKVD
FFNRIGQLLVWVQGAVMSTPTHCQILILGAALRMVTFTEVSEQSQDQVLPLLSPVAGLVQ
QHGRLAGSEAHSYTSAATLGLATALLHQCLLRCQVDSAQLHLAHSSVVPALLHATETYMK
CGEEEVVGELLHILATLSRISQLSEELSTEALSSTLTLIVPSSKTILLSEVVWVMVWGVM
REGVGGVEGGVNVAAVHLSALIGSLAAPHRQPGLALATAALVTALAPYASQWIVMHPTSH
SQLTAAATRCIHLTTHLLCTPRIVQMELSGESSSSTALTAPTNITSDSTSTASITPSTTA
VLNQMLQVLCACLGAIRSLGPDLTDLLCGPGIDVGAWLLFFHPSFRPVSAHDPSAQPSLA
SLTSVLDLYDSHASKESRGVSPCRSGAPEVGLCLRVLATCAEEALLLLLTQSTLALMSPE
TSPRDAVRIRHGLADEMNSFFTRWLGRRPAVSPLPSSATGVSAVSSSVQIDLTYLRFAQQ
LVGRLCATK
NT seq 4890 nt   +upstreamnt  +downstreamnt
atggaagacgtagaactggtcagtggaaaggctctgtggggtgttatatgtgggacatat
gtcttaccatcggatgaagtcgttggtgcagaactacagttggcatccccgcacttgcgt
attggtttagccgcatatacgaaacccagtggtgaccattatcagacatgggcacagact
tcagaagccacaaaggcagaaaaagatttcgtaaagaagctttcacagctactggatctg
tcggcaacccatagttgggagatttttcaactcttcttgcttcatgaatatcgaggtgca
gatgcatccttaacagaggtcttagctagtcagcgtgatgaagagacctttatggctcag
ctttggagtttctatttgggtgatcgcttgcatctacttcgctgtctgagacacattgtt
gcaaatacagcaaaccctgagcatccttaccagaatctgtttgatgactttatgcacgat
gtgcttgacaaggatggtacacttggggacagtctggtgcagcaagtgcagttgtgcacc
aggatgtgccctccatcccttcagactcatggatcgcatttaccgtcccatggacctcat
acttggcttgcccaccacttggctgaactgcgggaagtattagccatactcctggtctac
tatggcagtacttctcactctcctactcctgacacttttaaaaagcttttacaactggca
cagggaggtggtctaggtggacgacatgagattcaagaaggtttacgagatagtcatggt
tccttggtggaggccctggatgccacacacatgcttcttcttatccttgctataaatgcg
gactctcctactagtggtcatagcctctgtgatagtggatgggtgaccaagttagatccc
atcatggcaggtctgggagcacgaactccccacctagctccattgttagcctgggccgtg
ctgcagttacgggcaaatggtggaactgccacatccagtcccaagatatatcacaaactt
gctcatcgtgcactacatggaaatgtgtttggctatcttcagacagctttgaataataca
gcaatacagggagatgaattgcttctgcgtcttgcatcatcagtagtgtattcattggta
tgtgcggcagctggctctcttgacctagatcgtatgggctgcttaccaattttgaattct
ttggccaagccatgtctagcccaggttcccccagcacatctcttttgggcagaagaaggt
gggggagctggtctcctcttaccccaggcattagaggtgttcccacatgatgttgagcca
ctgctgtcactcactactgctctggctcaagcaaatcctgagagttgccacaaggtaatt
gaactccttagtgaacttccaagtattacatgggttgtctctggaaccgaatcccacagt
ctaaaagtgcgaggtagtgagtgctttactacagctccattgcacttaatgccaacagtg
actgtaccagcacacacatctgggatactgctgtctgctagtccactggttgtgacttgg
caaatgcctaccaatgcctggcaagctcttcttgccattatgaagatacttgattatgag
gtgagtagtggggcaagtctgcccgaccggagactaatggtaactgtgtgtgctactatg
caacttctgtcttcagttctgaccacagttcccagtcagctgtctgctcttgttctattt
ttccaacaaacagttggattaattcgcagggtggcacaggtgacccgaccttctggagaa
ctagttgcggctttacttcaatttcttgctgaagttgctgctcaggatccaaaattagta
tgggcagagattgaaggtagccccctgcttcccttcttggctgcttcagagactacagga
ctcaagaggggcaaagtagacccattccttggctaccgtgcaggaggcctccgtgctttg
gtgtgtggagtagaagctgcaaatggcagttacccaatattgcgctcctatactggctta
cttactgctgctattaagggaggtgtgggtagctgtagtgttaagggtggtgttgtgttc
atggccagagaggtaacaggtgctttgttgcgctggtgctacaaaagtcaagaggaaagg
gacactgtacttgaccattgcttggccctcctccaccatactcttgaagcttctagtatg
gattcaagtgttcgtgatctggtggtaaggcagcttgttgatagaagcagtgctgggcag
acattactttccgtggttgtgagtggagcaagcttagaatcagcactgaatcatcctaca
cactcccccatctctactcatgctcgtagactcacacgcacagcccaaatggctctctcc
attcttcacaggctagtaggtgaagacagcagtatgggtggactgagtcagcttcttcgt
gctgcaccgtctcttggagtaacacttggtgggggagggcgctcgctaggaagcagtagt
cctcctcacctagctcttactgtggctttatattcccatcaacggctcaaccctcgactg
tcttatttagctcttcgtacacttacccgatttgctcagaagcttgatgtccctctagtt
gcatgctttggaggtgaagccgatggaattcgagatgctctcttattacggttagactca
gcaacagaagatgtacgagtgaaggtggctttgttacgtctcctaacagcttctactact
cgtcagcaaggccttacaaatgcctttctcaccccccctgaaaagctacttaatcctctt
acttctcttgccagtttgtctacaaaaaatgaatccggaagagagctccttcttgcagta
gtagaactcttggatgccttatggagtgagaaatacacaacagctacagtgtatcttcag
gataaagaagatttttggaaagctttgatccacccactcaccactgacaaaccaggtgaa
gttagtgatgcagttgtgggtcacacagttagtgtccttgcccgacaacttttttcctct
gataccaaaccgacagcatgtctcaagtcagccatggatcaattgtgtgaacctgacaca
ggcaccatctgtctttggtcgaagcatatagttaaaagccttgagaatggatcaaattgt
agcaaagatgtcagcaggttgttgctacctgcctggcgagacttcctagtggtgctagta
gctcgagctaagtcttggctaaccaatgaccagaaggtaagcttggcaagtgacatcctt
caagccttgctgcatcaacttgaagtagaaactgttgatgaatcattgacagttctcatg
gctgaacttttcttatctcaagttaaacattgtggaaagcagctagctgagaaggtagat
ttttttaacagaataggccagctgctggtttgggtacaaggggctgttatgtccacgcca
actcactgccaaattcttatattaggtgctgcactaagaatggtcacattcaccgaagtc
tctgaacaatcacaagatcaggtattgccactgcttagccctgtagctggattggtgcaa
cagcatggtagactggccgggtcagaggcacatagttacacttcggctgccaccttgggc
cttgctactgctctactacatcagtgtctcttgcgctgccaggttgactctgcccaactg
caccttgcacactcctctgttgtgccagcacttctgcatgccactgagacctatatgaag
tgtggtgaggaagaagtagtaggagaattgcttcatatactggccacgctgtcccgcatt
tcacagttatctgaggagctctctacagaggcactgtcatcaacccttacactcattgta
ccgtcatcaaaaacgattcttcttagtgaagttgtgtgggtaatggtgtggggtgtgatg
cgtgagggagttggaggggtggagggtggtgtgaatgtagcagcagttcacctgtcagca
ctcattggctccctggcagctcctcatcggcaaccaggtcttgctttagcaactgctgca
cttgtgacagccctcgctccatatgcctcacagtggattgtcatgcacccaacgtcacac
tctcagttgactgctgctgctacccgctgtattcatctaacaacacacttactctgtaca
ccaaggattgtacaaatggagttgagtggtgaaagtagtagtagcactgctctgactgca
ccaacaaacataacatctgactctacctctacagctagcatcacaccgagcacaacagct
gttctcaatcagatgttacaagtactgtgtgcatgtcttggtgccatccgttccttaggc
ccagacttaactgacctcttatgtggacctgggatagatgtgggagcatggctacttttc
ttccatccatccttccgtcctgtgtctgctcatgatcctagtgctcagcccagtttggcc
tcactgacatctgttctagatttgtatgacagtcatgcttccaaggaaagccgtggcgta
tccccatgtcgtagtggtgctcctgaagttggcctgtgtttgagagtgttagccacatgt
gcagaggaggccttgctactactacttactcagtccaccctagcattaatgagtcctgaa
acttccccacgtgatgcagtccgaattcgtcatggactcgcagatgaaatgaattcattc
ttcacacgatggttaggccgacgaccagcagtttcacctctgccgtcatctgctacaggt
gtttctgctgttagcagttcagtccaaatagatttaacttatttacgctttgcgcagcaa
cttgtgggaaggctttgtgcaacaaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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