KEGG   Panulirus ornatus (ornate spiny lobster): 139749645
Entry
139749645         CDS       T10834                                 
Symbol
SmD2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139749645 (SmD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:porn03041]
    139749645 (SmD2)
   03032 DNA replication proteins [BR:porn03032]
    139749645 (SmD2)
Spliceosome [BR:porn03041]
 Complex A
  U1 snRNP components
   Sm proteins
    139749645 (SmD2)
  U2 snRNP components
    139749645 (SmD2)
 Complex B
  U1 snRNP components
    139749645 (SmD2)
  U4/U6.U5 tri-snRNP components
    139749645 (SmD2)
 Complex C
  U2 snRNP components
    139749645 (SmD2)
DNA replication proteins [BR:porn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     139749645 (SmD2)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 139749645
NCBI-ProteinID: XP_071519918
Position
7:51629382..51647013
AA seq 110 aa
MTPEELTALEKEEFATGPLRILNESVQNNTQVLINCRNNKKLLGRVKAFDRHFNMVLEQV
TEIWMEQPKTAKGQKKAKPVNRERYIQKMFLRGDSVIIVVKNPLGSQQSA
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaccccagaggagctgacagctctcgagaaagaggaatttgccacaggaccactacgt
atcttgaatgagtctgttcagaataatacccaagttttgattaattgccggaacaataaa
aaactgcttggccgtgtaaaggcgttcgaccggcactttaacatggttttggagcaggtg
acagagatctggatggagcaacctaaaacagcaaagggtcaaaagaaagcaaagccagtt
aaccgtgaaaggtatattcagaaaatgtttttacgaggggactctgtgatcatcgtagtg
aagaatccgcttggcagtcagcagagtgcataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

Download RDF
DBGET integrated database retrieval system