KEGG   Panulirus ornatus (ornate spiny lobster): 139766931
Entry
139766931         CDS       T10834                                 
Symbol
Upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
  KO
K14327  regulator of nonsense transcripts 2
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013  Nucleocytoplasmic transport
porn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139766931 (Upf2)
   03015 mRNA surveillance pathway
    139766931 (Upf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:porn03019]
    139766931 (Upf2)
Messenger RNA biogenesis [BR:porn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     139766931 (Upf2)
   mRNA cycle factors
    P-body specific factors
     139766931 (Upf2)
SSDB
Motif
Pfam: MIF4G Upf2
Other DBs
NCBI-GeneID: 139766931
NCBI-ProteinID: XP_071552083
Position
58:10892858..10933302
AA seq 1272 aa
MEGGKGERRGGKSWRKEREEREKKRINNKGAASSTKDPDEKREDPVKEHEVLEYQKQEEE
ARKKAEEDKKQKDEAEVAAAQAKQEEEEEMRKREDEEIKRREEEVMKKLEEDRTFLASYI
QEAEVRLSRKAELRVQNLAMAKDRPELNTAMLDSSLKKNTAFIKKLKNLTESQHDSLVRD
LQSLNLTKYVSEVAQAVVEAKLKMSDISTAVHLCSLLHQRYHDFASALLENWQKVLSPKK
EEKVCKNTNMSKLRVDLRLYAELITAGIFAPKEGLPLLGNVLTTLVTSDKEEHQNIAVLL
TFCRHCGEDYMGLVPRKIRLLSDQFEMSVPKSEFLPRERQKNVRQLLKDYFTSLVKHLFH
DHKELQQVEQQNRRLLQTRGELGQDRVNLSENLAAGLGKLLANAQQMAELLDEDMPELPE
DKTQGDDLGLCDIGMGEGGEIPEGGTAILWEDDDTRAFYENLPELKALIPSILYSDSEKP
TAVPAEETPTEVVDETLEEEELEVMETTEEDPEEVLPPELPPEEEQDDSLTGSGPSSNKV
LLDAFVNALPNCINRDLIDSAAMEFCLRLNTKPSRKKLVRALFLVPRTRLDLLPFYSRLV
ATLQPLMPDLATDLVNMLRQDFKYQVRKKDQINIESKIKVVRFIGELVKFRVFPRSEALL
CLRMLLQDFNHHHIEMACNLLETCGRFLYRIPDSHHRTKIYLEQMMRKKTVKAFDPRYNT
MIENAYFYVNPPDTGPDSAKKERPPMHQYIRKLLYNDLCKSNTEKILRQMRKMHWEDSAI
AGYIVKCLTAVWNAKFYNIRCIANLVAGLISHHDWVGPAVVDGILEDIRLGLEVNHPKYN
QRRVAAVKYLGELYNYRVIESTIIFKVLYLLISFGVVFDPSVFSEYDPPEHLFRIRLVCT
LLETCGQFFSSGSSKRRLDCFLIYFQHYYLYKKNLNIWNEEHEFPWQIEHLVKDTISAVR
PKLQLTVTLEDAQKAVQHLNNQIVAKAIEQVPSLRQYLEPEEDNEGLHTIDEEAGDNQVL
ELEGDMLEDMEDEEEYEEMEGELDWSESHGDSLTPSQHSQPGRSAMEEEGEGVLTGDGEE
EIGDDDGELLDGEILEGDMKVNVKHVDCEEDTDFMSAFDRMMAESIMERASTVPRPGQLD
ISVPVHVKSTAKKTYDQLLCEGTEEENKPVVNFVLMTRSGNKQQYNSVEMPVDSELVTKL
RTREEAERAEKEKVKRMTLEINERQEEEEAAEIMQQAQRPPTMNFNRDRRPKYQHPKGAP
DADLIFGPKKIR
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggaaggtgggaagggtgagaggcgcggtggaaagagctggaggaaggagcgtgaggaa
cgagagaagaaacggatcaataacaaaggtgcagcgtcttccaccaaagatcctgacgag
aagagagaggaccctgtgaaggagcatgaagttctggagtaccagaaacaggaagaagag
gccaggaaaaaagcagaagaagataagaaacaaaaggatgaagcagaagtagcagcagct
caagccaagcaggaagaggaggaggaaatgagaaagcgtgaggacgaggaaataaaaagg
cgggaagaggaagtaatgaagaaattggaagaggaccgtactttccttgcatcatatatc
caggaggctgaagtgcgattgtcgaggaaggcagaacttcgagtgcagaacttagccatg
gcaaaagatcgacctgagctcaatacagcaatgttggattccagtttgaagaagaacaca
gcttttattaagaaactaaaaaacttgactgagagccagcatgattctttggtaagagat
ctacagagcctcaacctgaccaagtatgttagtgaagtagcccaggcagtagttgaggcc
aaactgaagatgtcagacatctccacagctgttcatttatgttctctacttcaccagagg
taccatgattttgcttcagcattgttagagaactggcagaaggttctctctccaaaaaag
gaagagaaggtatgtaagaacacaaacatgagtaagcttcgagtggatctgcgtctgtat
gctgaactcataactgctgggatttttgcaccaaaggaaggtcttccccttttaggtaat
gtgttaacaacactggtgacatcagacaaggaagaacatcaaaatattgcagtattactt
accttctgtcgtcactgtggtgaagattatatggggctggtgccacggaaaataagactc
ctttcagatcaatttgagatgtctgttcccaaaagtgagtttcttccacgagagagacag
aagaatgtgagacagctgcttaaagactatttcacttccctcgttaaacacctgtttcat
gatcataaggaactacaacaagtggagcaacagaaccgtcggctgttacagacccgtggt
gagcttggtcaagatcgtgtgaacttgtctgagaaccttgctgctggactaggaaaactt
ctggctaatgctcagcaaatggctgaattgctagatgaagatatgcctgagctgcctgaa
gataaaactcaaggtgatgatctaggcctctgtgatattggaatgggtgaaggtggagag
attcctgaaggagggacagctattctgtgggaagatgatgacaccagggcattttatgaa
aatttaccagagctcaaggcactcattccttctatattatacagcgattctgagaaacca
acagccgttcctgcagaagaaactccaacagaagtagtggatgaaactctggaggaagaa
gaactggaagttatggaaacaacagaagaggacccagaggaagtattaccacctgaacta
ccaccagaggaagaacaagatgacagcttaactggctcaggaccatcttcaaataaagtg
ttactagatgcctttgttaatgctctacctaattgcattaaccgagatttgattgacagt
gctgccatggaattttgtcttagactaaacactaagcccagcaggaaaaaattagtcaga
gcgttgtttttggtgccaaggacaagattggatttacttccgttttattcacggcttgtg
gccaccctgcagcctctcatgccagatctggcaactgatttagtgaacatgctgcgacaa
gactttaagtatcaagtccgaaaaaaagatcaaataaacatagagtccaaaatcaaagtt
gtacggttcattggagagttagtcaagtttcgtgtcttcccccgtagtgaagctctgctg
tgcttacgaatgctacttcaagacttcaatcatcaccatattgaaatggcctgcaacctc
ttggaaacatgtggacgattcctctatagaattccagattctcaccaccgcacaaagatt
tacctcgagcagatgatgagaaagaagacagtgaaggcctttgatccaaggtacaatact
atgattgaaaacgcgtacttttatgtgaaccctccggatactggcccagactcagccaaa
aaagagcgtccaccaatgcaccaatatatacgtaaacttctttacaatgacctttgtaag
tccaatacagagaaaattttaagacagatgcggaagatgcattgggaagattcagctatt
gctggctacattgtgaagtgtctgactgctgtttggaatgccaagttttacaatatacgt
tgtattgcaaatcttgtagcaggactcatctcacatcatgactgggtgggtccagctgtt
gtggatggtattttggaagatatacgtcttgggttagaggtgaaccatcccaagtacaat
cagaggcgtgtagctgctgttaaatacttaggagagctgtataattaccgtgtaattgaa
agcacaatcatttttaaggtcctgtatttgttaatttcatttggggtggtttttgacccc
agtgtgtttagtgaatatgaccccccagagcacctgttccgtatacgtttggtatgcaca
cttctggaaacttgtggacagttcttcagttcaggttccagcaagcgtcgtcttgattgc
tttcttatctatttccaacactattacctgtataagaaaaatttgaatatatggaatgag
gagcatgaattcccttggcaaattgagcatctggtcaaggataccatctcagcagtcagg
cccaaactacaactcactgtcactttagaagatgctcagaaggctgttcagcatcttaat
aatcaaattgtggccaaagcaatagaacaagtccccagcttacggcagtatcttgagcct
gaggaagacaatgaaggtctccacaccatagacgaagaagctggtgacaatcaagttttg
gaattagagggagatatgttggaagatatggaggatgaagaagaatatgaagagatggaa
ggagagttagactggagtgaatcacatggagattccctcactccttcccagcacagtcaa
cctggtcgcagtgccatggaggaggaaggtgaaggagtactgacaggagatggagaagaa
gaaattggagatgatgatggagaattgctggatggagaaatattagagggagacatgaaa
gtcaatgtcaaacatgttgactgtgaagaagacacagattttatgtcagcatttgaccgt
atgatggcagaaagcattatggagcgtgccagtactgtcccacgacctggccagctggat
atatctgtgcctgtgcatgttaagtccactgctaagaagacatatgatcaactgctgtgt
gagggtactgaagaagaaaacaaacctgtggtaaactttgtcctaatgacacgctctggc
aacaaacaacagtacaatagtgtggagatgcctgttgactcagaactggtaacaaagctc
cgaacccgggaagaggcagaaagagctgagaaagaaaaggttaaacgcatgaccctagaa
ataaatgaacgtcaagaagaggaggaggctgctgaaattatgcaacaggcacaacggcca
ccgaccatgaacttcaaccgtgatagacggccaaaatatcaacacccgaaaggtgcccca
gatgcagatcttatttttggacctaagaagataagatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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