KEGG   Komagataella phaffii: PAS_chr1-1_0059
Entry
PAS_chr1-1_0059   CDS       T01092                                 
Name
(RefSeq) Transcription factor TFIIB, a general transcription factor
  KO
K03124  transcription initiation factor TFIIB
Organism
ppa  Komagataella phaffii
Pathway
ppa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PAS_chr1-1_0059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr1-1_0059
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     PAS_chr1-1_0059
 Prokaryotic type
  Archaeal type
    TFB
     PAS_chr1-1_0059
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF HTH_AsnC-type MOM1 HTH_24
Other DBs
NCBI-GeneID: 8197576
NCBI-ProteinID: XP_002489698
UniProt: C4QVZ4
Position
1:658387..659415
AA seq 342 aa
MTALTEEGSFKGPDLNVALICRDCKVDPPELIERFSEGDVICGLCGLVLSEHIVDMRSEW
RTFNNDDQNGDDPSRVGEAQNPLLDGDQLSTIIAYNTDNTRMGRELSRAQNSTVADRKDS
ALQAAFAKISQLCEGFQLPNIVQNGAKEVYKLVYNERSLKGKSQESIMAAAIGLACRKAN
VPRSFKELWALTDVPKNEIGKVFKIIHKLIQQKHALAGGLLNVQNESIATTQTNAEALIG
RFCSNLGLSRQITNAAEYIARRTKEVGVLAGRSPVTVAATVIYMAASIFDASISPAQIAQ
RAGVSDGTIKTSYKYLYDKREELVDPQWIESGKVKLENIPKN
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgacagccttaaccgaagaaggaagtttcaaaggtccggatctcaatgttgctttgatt
tgccgagactgtaaggtggatcctcccgaactaatcgagagatttagtgagggagacgtc
atttgcggattgtgtggattggttttgagtgaacatatcgtagacatgagatcggaatgg
cgtacgttcaataacgacgatcaaaacggtgatgatccctcccgtgtgggtgaagcacag
aaccctttattggatggagaccagctgtccacaatcattgcatataacacagataatacc
cgaatgggaagagaacttagtagagcgcagaatagcaccgtagctgaccgtaaagacagt
gctttacaggcagcatttgctaagatatctcagttatgcgaaggttttcagctgcctaat
attgtacaaaatggagcaaaagaagtgtataaactggtgtacaatgaaaggtccctgaag
ggtaagtcccaggagagtatcatggcagcagctattgggttagcctgtcgaaaagctaat
gttccacgttcattcaaagagctttgggcattgactgatgttcccaaaaatgagattggt
aaagttttcaagattattcacaaactgatacagcagaagcatgctctagctggcggacta
ttgaacgttcaaaatgaaagcatagcaacaacccagacgaatgcagaagccttgattggt
agattttgttctaatttgggtttgtctcgtcaaataaccaatgcagcagagtacattgcc
cgtcgtactaaggaagtcggcgttcttgcaggtcgatcaccggtaactgttgctgcaacg
gtaatttatatggcagctagcatctttgatgccagtatttccccagcccagattgctcag
agagcaggcgtatctgatggaactataaagacctcatacaagtacctgtatgacaagcgg
gaggaattggtcgaccctcaatggattgaatcaggtaaagttaagttagagaacatccct
aaaaactga

  All links  
Gene (18)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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