KEGG   Komagataella phaffii: PAS_chr2-2_0135
Entry
PAS_chr2-2_0135   CDS       T01092                                 
Name
(RefSeq) General transcription elongation factor TFIIS
  KO
K03145  transcription elongation factor S-II
Organism
ppa  Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr2-2_0135
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     PAS_chr2-2_0135
SSDB
Motif
Pfam: TFIIS_M Zn_ribbon_TFIIS Med26 C2c1_Nuc-II
Other DBs
NCBI-GeneID: 8198713
NCBI-ProteinID: XP_002492070
UniProt: C4R2R6
Structure
Position
2:complement(2132742..2133599)
AA seq 285 aa
MDAKEIVTVMKDLEKAESDSQIIRLLTLLQTDVVPTEKVLRETKVGVTVNRLRSHANPEV
GTLVKKIIKTWKDGVSQEKKKKAVSSAGSPAKSTTSTTTNERFVSKGPRTPKNDGVKVEI
YENKTRNGSISAIYTALAMDSDEQPSKIFELVKDIEKQCFKAVNFTVDDTYRNKLRSLIM
NLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQGATENNS
VTDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRWKFS
NT seq 858 nt   +upstreamnt  +downstreamnt
atggacgcaaaagagatcgtcactgtgatgaaagaccttgaaaaggccgaaagtgattcc
cagataataaggcttttaacacttttgcagacggatgttgttcccacggagaaagttttg
agggagaccaaagttggtgtcacagtgaataggctcaggtctcacgcaaatcctgaggtt
ggaaccttagttaagaagattataaagacctggaaggatggcgtatctcaagaaaagaaa
aagaaagcagttagttcagcgggtagtcctgctaagagtacgaccagtacaacgacgaat
gagaggtttgtcagtaaaggaccaagaactccaaagaatgacggggtcaaagttgagatc
tacgagaacaagactcgtaacggatctattagcgccatatacacagcattggctatggat
tctgatgaacagcctagcaagatctttgagttagtcaaggatattgagaaacagtgtttc
aaagctgtcaattttaccgttgatgatacctatagaaacaaattacggtcattaataatg
aatttgaagaataagaacaatccaactcttcgaaggtctattctagatcacgaaataatc
ccatccaaactagtgaccatgtctgcccaagagttagctcccgattctctcaaaaaggaa
atggaggaaatatacaagaagaacttatttgacgctcaaggcgccacggagaataactct
gttacagatagatttgagtgtggtaagtgtaagcaaaggaaggtcagttacttccagaaa
cagacaaggtcggctgatgaaccgttgaccaccttttgtaaatgtgagaactgtggtaat
aggtggaagtttagttga

  All links  
Gene (33)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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