KEGG   Phocoena phocoena (harbor porpoise): 136119911
Entry
136119911         CDS       T11058                                 
Symbol
TUBB4A
Name
(RefSeq) tubulin beta-4A chain isoform X1
  KO
K07375  tubulin beta
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc04145  Phagocytosis
pphc04517  IgSF CAM signaling
pphc04540  Gap junction
pphc04814  Motor proteins
pphc05010  Alzheimer disease
pphc05012  Parkinson disease
pphc05014  Amyotrophic lateral sclerosis
pphc05016  Huntington disease
pphc05020  Prion disease
pphc05022  Pathways of neurodegeneration - multiple diseases
pphc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    136119911 (TUBB4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    136119911 (TUBB4A)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    136119911 (TUBB4A)
  09142 Cell motility
   04814 Motor proteins
    136119911 (TUBB4A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    136119911 (TUBB4A)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    136119911 (TUBB4A)
   05012 Parkinson disease
    136119911 (TUBB4A)
   05014 Amyotrophic lateral sclerosis
    136119911 (TUBB4A)
   05016 Huntington disease
    136119911 (TUBB4A)
   05020 Prion disease
    136119911 (TUBB4A)
   05022 Pathways of neurodegeneration - multiple diseases
    136119911 (TUBB4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pphc03036]
    136119911 (TUBB4A)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pphc04812]
    136119911 (TUBB4A)
   04147 Exosome [BR:pphc04147]
    136119911 (TUBB4A)
Chromosome and associated proteins [BR:pphc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     136119911 (TUBB4A)
Cytoskeleton proteins [BR:pphc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    136119911 (TUBB4A)
Exosome [BR:pphc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136119911 (TUBB4A)
  Exosomal proteins of colorectal cancer cells
   136119911 (TUBB4A)
  Exosomal proteins of bladder cancer cells
   136119911 (TUBB4A)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2
Other DBs
NCBI-GeneID: 136119911
NCBI-ProteinID: XP_065729306
Position
3:168461719..168466742
AA seq 420 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWSCDCLQGFQLTHSLGGGTG
SGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK
EVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQ
FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcgggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggagccaagttt
tgggaggtgatcagtgatgagcatggcatcgatcccactggcacataccatggggatagt
gacctgcagctggagaggatcaacgtgtactacaatgaggccacaggaggaaattacgtc
cccagagctgtgctggtggacctcgagccgggcaccatggactctgtccgctcaggtccc
ttcggccagatctttcgtcctgacaactttgtgtttggccagtctggagccggcaacaac
tggagctgtgactgcctgcagggcttccagctgacccactcgctgggcgggggcacgggg
tccgggatgggcaccctcctcatcagcaagatccgcgaggagttcccggaccgcatcatg
aacaccttcagcgtggtgccgtcacccaaggtgtcggacacggtggtggagccctacaac
gccaccctgtccgtgcaccagctggtggagaacacagacgagacttactgcatcgacaac
gaggcgctgtacgacatctgcttccgcaccctgaagctgaccacgcccacctacggggac
ctcaaccacctggtgtctgccaccatgagcggggtcaccacgtgcctgcgcttcccgggc
cagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttcccgcgcctgcac
ttcttcatgcccggcttcgcgccgctgaccagccggggcagccagcagtaccgggcgctg
acggtgcccgagctcacccagcagatgttcgacgccaagaacatgatggccgcctgcgac
ccgcgccacggccgctacctgaccgtggccgctgtgttccggggccgcatgtccatgaag
gaggtggatgagcagatgctgagcgtgcagagcaaaaacagcagctacttcgtggagtgg
atccccaacaacgtgaagacggccgtgtgcgacatcccgccccgcggcctgaagatggcc
gccaccttcatcggcaacagcacggccatccaggagctgttcaagcgcatctcggagcag
ttcacggccatgttccggcgcaaggccttcctgcactggtacacgggcgagggcatggac
gagatggagttcaccgaggccgagagcaacatgaacgacctggtgtccgagtaccagcag
taccaggacgccacggccgaggagggggagtttgaggaggaggccgaggaggaagtggcc
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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