KEGG   Phocoena phocoena (harbor porpoise): 136124098
Entry
136124098         CDS       T11058                                 
Symbol
TUBB4B
Name
(RefSeq) tubulin beta-4B chain isoform X1
  KO
K07375  tubulin beta
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc04145  Phagocytosis
pphc04517  IgSF CAM signaling
pphc04540  Gap junction
pphc04814  Motor proteins
pphc05010  Alzheimer disease
pphc05012  Parkinson disease
pphc05014  Amyotrophic lateral sclerosis
pphc05016  Huntington disease
pphc05020  Prion disease
pphc05022  Pathways of neurodegeneration - multiple diseases
pphc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    136124098 (TUBB4B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    136124098 (TUBB4B)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    136124098 (TUBB4B)
  09142 Cell motility
   04814 Motor proteins
    136124098 (TUBB4B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    136124098 (TUBB4B)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    136124098 (TUBB4B)
   05012 Parkinson disease
    136124098 (TUBB4B)
   05014 Amyotrophic lateral sclerosis
    136124098 (TUBB4B)
   05016 Huntington disease
    136124098 (TUBB4B)
   05020 Prion disease
    136124098 (TUBB4B)
   05022 Pathways of neurodegeneration - multiple diseases
    136124098 (TUBB4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pphc03036]
    136124098 (TUBB4B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pphc04812]
    136124098 (TUBB4B)
   04147 Exosome [BR:pphc04147]
    136124098 (TUBB4B)
Chromosome and associated proteins [BR:pphc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     136124098 (TUBB4B)
Cytoskeleton proteins [BR:pphc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    136124098 (TUBB4B)
Exosome [BR:pphc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136124098 (TUBB4B)
  Exosomal proteins of colorectal cancer cells
   136124098 (TUBB4B)
  Exosomal proteins of bladder cancer cells
   136124098 (TUBB4B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 136124098
NCBI-ProteinID: XP_065734533
Position
6:114926554..114928924
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEVA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatagtgcacctgcaggccggccagtgcggcaaccaaatcggcgcaaagttt
tgggaggtgatcagcgatgagcatggcatcgatcctaccggcacctaccacggggacagc
gacctgcagctggagcggatcaacgtgtactacaacgaggccacgggtggcaagtacgtg
ccccgcgccgtgctcgtggatctggagccgggcaccatggactccgtgcgctcggggccc
ttcgggcagatattcaggccggacaacttcgtcttcggtcagagcggtgccgggaacaac
tgggccaaggggcactacacagaaggtgcggagctggtggactcggtgctggatgttgtg
aggaaggaagcggagagctgcgactgcctgcagggcttccagctgacccactcgctgggg
ggcggcaccgggtccgggatgggcacccttctcatcagcaagatccgcgaggagtaccca
gacagaatcatgaacaccttcagcgtggtgccctcgcccaaggtatcggacaccgtggtg
gagccctacaacgccaccctctctgtccaccagctcgtagaaaacacagacgagacctac
tgcattgataacgaggctctctatgacatctgcttcagaaccctgaagttgaccacgccc
acctatggtgacctgaaccacctggtgtcggccaccatgagtggggtcaccacctgcctg
cgcttcccaggccagctcaatgctgacctgcgaaagctggctgtcaatatggtccccttc
ccccgtctgcacttcttcatgcccggcttcgccccactgaccagccggggcagccagcag
taccgggcgctgacggtgcccgagctcacccagcagatgtttgatgccaagaacatgatg
gcggcctgtgacccccgccatggccgctacctgaccgtggccgccgtgttccggggccgc
atgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagcagctat
ttcgtcgagtggatccccaacaacgtgaaaacagccgtttgtgacatcccaccccggggg
ctaaaaatgtccgccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcacggccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccacggccgaggaggagggggagtttgaggaggaggcc
gaggaggaggtggcctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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