KEGG   Phocoena phocoena (harbor porpoise): 136128737
Entry
136128737         CDS       T11058                                 
Name
(RefSeq) tubulin beta-2B chain isoform X1
  KO
K07375  tubulin beta
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc04145  Phagocytosis
pphc04517  IgSF CAM signaling
pphc04540  Gap junction
pphc04814  Motor proteins
pphc05010  Alzheimer disease
pphc05012  Parkinson disease
pphc05014  Amyotrophic lateral sclerosis
pphc05016  Huntington disease
pphc05020  Prion disease
pphc05022  Pathways of neurodegeneration - multiple diseases
pphc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    136128737
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    136128737
  09144 Cellular community - eukaryotes
   04540 Gap junction
    136128737
  09142 Cell motility
   04814 Motor proteins
    136128737
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    136128737
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    136128737
   05012 Parkinson disease
    136128737
   05014 Amyotrophic lateral sclerosis
    136128737
   05016 Huntington disease
    136128737
   05020 Prion disease
    136128737
   05022 Pathways of neurodegeneration - multiple diseases
    136128737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pphc03036]
    136128737
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pphc04812]
    136128737
   04147 Exosome [BR:pphc04147]
    136128737
Chromosome and associated proteins [BR:pphc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     136128737
Cytoskeleton proteins [BR:pphc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    136128737
Exosome [BR:pphc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136128737
  Exosomal proteins of colorectal cancer cells
   136128737
  Exosomal proteins of bladder cancer cells
   136128737
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 136128737
NCBI-ProteinID: XP_065740637
Position
10:103290349..103293120
AA seq 445 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEQGEFEEEEGEDEA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcgtgagatcgtgcacatccaggcgggccagtgcggcaaccagatcggcgccaagttt
tgggaggtcatcagcgatgagcatgggatcgaccccaccggcagttaccatggagacagt
gacctgcagctggagagaatcaacgtgtactacaatgaagccactggtaacaaatacgtg
cctcgggccatcctggtggatctggagccgggcaccatggactcggtcaggtctggaccc
ttcggccagatcttccggcccgacaacttcgtgtttggccagagcggtgccggcaacaac
tgggccaagggccactacacggagggcgcggagctggtggactcggtcctggacgtggtc
cggaaggagtcagaaagctgtgactgtctgcagggcttccagctgacccactcgctgggc
ggcggcactgggtccgggatgggcaccctcctcatcagcaagatccgcgaggagtacccc
gaccgcatcatgaacaccttcagcgtgatgccctcgcccaaggtgtcggacacggtggtg
gagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggacgagacctac
tgcatcgacaacgaggcgctgtacgacatctgcttccgcaccctgaagctgaccacgccc
acctacggggacctcaaccacctggtgtcggccaccatgagcggggtcaccacgtgcctg
cgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttc
ccgcgcctgcacttcttcatgcccggcttcgcgccgctgaccagccggggcagccagcag
taccgcgcgctgacggtgcccgagctcacccagcagatgttcgactccaagaacatgatg
gccgcctgcgacccgcgccacggccgctacctgaccgtggccgccatcttccggggccgc
atgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagcagctac
ttcgtcgagtggatccccaacaacgtgaagacggccgtgtgcgacatcccgccccgcggg
ctcaagatgtcggccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcacggccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccacggccgacgagcagggggagtttgaggaggaggag
ggcgaggacgaggcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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