KEGG   Physcomitrium patens (spreading earthmoss): 112281111
Entry
112281111         CDS       T01041                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp04145  Phagosome
ppp04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112281111
  09142 Cell motility
   04814 Motor proteins
    112281111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112281111
   03036 Chromosome and associated proteins [BR:ppp03036]
    112281111
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ppp04812]
    112281111
   04147 Exosome [BR:ppp04147]
    112281111
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112281111
Chromosome and associated proteins [BR:ppp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112281111
Cytoskeleton proteins [BR:ppp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112281111
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112281111
  Exosomal proteins of other body fluids (saliva and urine)
   112281111
  Exosomal proteins of colorectal cancer cells
   112281111
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 112281111
NCBI-ProteinID: XP_024373069
Position
4:complement(1165377..1167292)
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSVGGGDDAFNTFFSETGAGK
HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEDGGEDDGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagtgcatttcgatccacatcggtcaggccggtatccaggtcggaaacgcctgc
tgggagctgtactgtttggagcatggcattcagcctgatggacagatgccaagtgacaag
tcggtgggaggaggagacgacgccttcaacactttcttttcggagacaggagccgggaag
cacgttcctcgtgcggtgtttctcgatttggagccgactgtgatcgatgaggtgcgcacc
ggaacgtaccgtcagctgttccacccggagcagctgatcagcgggaaggaggacgcggcg
aacaacttcgcccgtggtcactacactatcgggaaggagatagtggacctgtgccttgac
cggattaggaagctggcggacaactgcacgggtctgcagggcttccttgtgttcaacgct
gtgggaggaggaacgggatctggtttgggaagtctgctgctggagcgcctgtccgtggac
tacgggaagaagtcgaagctcgggttcacagtgtatccatcgccacaggtgtcgacctcc
gtggtggagccatacaacagtgtgctgtcgacgcactcgctgttggagcacaccgacgtg
gctgtgctgctggataatgaagcgatatacgacatttgtcggaggtctttggacatcgag
cgcccaacttacacgaacttgaaccggctggtgtctcaggtcatctcctccttgaccgcg
tcactccggttcgacggtgcgctgaatgtggatgtgacggagtttcagaccaacttggtg
ccataccccaggattcacttcatgctgtcgtcgtacgcaccagtgatatcggcggagaag
gcgtaccacgagcagctgtcggtggcggagatcacgaactctgcgttcgagccgtcatct
atgatggcgaagtgcgatcctcgtcacggcaagtacatggcgtgctgcctgatgtacagg
ggagacgtggttccgaaggacgtgaatgccgcggtggcgacgattaagacgaagaggacc
atccagtttgttgactggtgtcccactggattcaagtgcggcatcaactaccagccaccg
acggtggtgccgggtggagatctggcgaaggtgcagagggcggtgtgcatgatttcgaac
agcacgagcgttgcagaggtgttctcccggatcgaccataagttcgatctgatgtacgcg
aagcgcgctttcgtgcactggtatgtgggcgaaggtatggaggagggagagttttcggag
gctcgtgaggatcttgcggctctggagaaggattacgaggaagtgggtgcggagtcggct
gaggacggcggcgaagacgacggtgaagagtactga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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