KEGG   Physcomitrium patens (spreading earthmoss): 112289769
Entry
112289769         CDS       T01041                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112289769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112289769
   03041 Spliceosome [BR:ppp03041]
    112289769
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112289769
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112289769
Spliceosome [BR:ppp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112289769
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 112289769
NCBI-ProteinID: XP_024391093
Position
12:9415569..9421922
AA seq 460 aa
MDQKKRKLEDSPVTIVKEEHVSATGAPAASVPTFVITKEDVKKLVEPFTKEQLMDLLENA
ALNHADVLHEIRKLADKDPGHRKIFVRGLGWDTTTETLKTVFSQFGEVEEGAVIMDKATG
KSRGFGFVTFKHMDGAQRSLKEPSKRIDGRMTVCQLASTGALQVNPNQEVSQRKIYVGNV
PLDLSADRLLALFAGYGEIEEGPLGFDKFTGRSRGFALIIYKTVEAAKRALLEPIKTLDG
IQMYCKLAAENQKQGQGRQGTAGKNDSDMMMGRQQVSTPQSLSNGQNLPYGSMNTGLITT
GIPLNQGANQGISQGNHLGLSGHNQGLSGLNSTLNPSLNYPLNSSLSSIGQLSNPSLNNS
FNSSLPQTSLGMGSYGSQLGMSQYGGQPSGLGGQPTYSSMNGVLYGSAANSVASQQQAAL
QVAGGHYGYGSYQNPQLPASSAPRAPPVGNMYLPSSNYGI
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggaccagaagaagaggaagttggaagactcgccagtcacgattgtgaaagaagagcat
gtttctgcaactggtgcaccagctgcgtctgttcctactttcgtgatcacgaaggaggac
gtgaagaagctggtggagccttttaccaaggagcagttaatggacttattagagaacgct
gcccttaatcatgcagatgtccttcatgaaattcgcaaactagctgacaaagaccctggt
catcggaagattttcgtgaggggacttggatgggatacaactactgagactttgaaaaca
gtgttctcacagtttggagaagttgaagagggggcagttatcatggacaaagcaactgga
aagagcagaggttttggatttgtgacattcaagcacatggatggtgcccaacggtcactg
aaggaacctagcaagcgaattgacggacggatgacggtttgtcagttggcatcaactggg
gctctgcaagtgaatcccaatcaagaagtctcgcagaggaaaatttatgtcggcaatgta
ccccttgatctttctgccgataggttgcttgctttgttcgcagggtatggggaaattgaa
gagggccctttaggattcgataaatttaccggacgctcacgaggatttgctttgattatc
tacaagacggttgaagctgctaaaagggcattgctagagccaatcaagactttagatggt
attcaaatgtattgtaaactagctgcagagaatcagaagcaggggcagggaagacaaggc
actgcagggaaaaacgacagtgacatgatgatgggcaggcagcaagtgtccactcctcag
tcactctcaaacggacagaacttgccatacggctccatgaatactggtctaataactacc
ggaattcctcttaaccagggtgcgaatcaaggaattagccaaggaaatcatttaggcctt
agtggccacaatcaaggtcttagtggcttgaacagtaccttgaacccgtccctcaactac
ccactgaattcatcactatcttcaataggacagttatcgaacccctcgttaaacaattct
tttaactccagtctcccacaaacatcccttggaatgggatcctatggttcacaactgggt
atgtctcaatatggaggtcaaccatctggtcttggtgggcagcctacgtactcttcgatg
aatggggttttgtatggatcagcagcgaactcagtagcttctcagcagcaagcagcgctg
caggtagccggaggtcattacggatatgggtcgtatcaaaatcctcaacttcctgcctca
tctgctcctcgtgctcctcctgttggaaatatgtatttgccttctagcaattacggcata
tga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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