KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_005060
Entry
PPSQR21_005060    CDS       T03178                                 
Symbol
nrdF
Name
(GenBank) ribonucleoside-diphosphate reductase subunit beta
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
ppq  Paenibacillus polymyxa SQR-21
Pathway
ppq00230  Purine metabolism
ppq00240  Pyrimidine metabolism
ppq01100  Metabolic pathways
ppq01232  Nucleotide metabolism
Module
ppq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ppq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PPSQR21_005060 (nrdF)
   00240 Pyrimidine metabolism
    PPSQR21_005060 (nrdF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppq03400]
    PPSQR21_005060 (nrdF)
Enzymes [BR:ppq01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PPSQR21_005060 (nrdF)
DNA repair and recombination proteins [BR:ppq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PPSQR21_005060 (nrdF)
SSDB
Motif
Pfam: Ribonuc_red_sm Phenol_Hydrox FA_desaturase_2
Other DBs
NCBI-ProteinID: AHM64170
Position
complement(560048..561079)
AA seq 343 aa
MQLQKIFNTEAPNRSTRIIEGENSGILNWNDIRMPHMYKLYKVLLLNHWIPDEIPMSKDA
SQFPMLDAEEQRTFKINIGLLAVLDSMQTMFVGDVKRYFTDSSLEAISAIIGQQEVVHNQ
SYSYVLSSLVSEQEQKEIFEYWKNDPVLLERNTFISDIYQEFRDEQNPQTFFQAMVADLI
LEGIFFYSTFAFFYNLARDQKMMATSQMISYIQRDENQHCYFFAEVFKQLLADFPELNTK
ENTDYVYRMINRAVELETNWAHYTLKEVRGIDLNELSDYIKYMANMRLRLLGMDKAYEGV
DVNCMPWIKPFSDEALNATKTDFFEAKSRNYGKVGDDNGFDDL
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcagttacaaaagatttttaacacggaagcgcctaaccgctctacccgtattattgaa
ggcgaaaactccggtatcctgaactggaacgatattcggatgccgcatatgtacaaacta
tataaggtgctgctgctaaaccactggattccggatgaaattccgatgtccaaggatgcg
tcccagttccctatgctggatgccgaagaacagcgcacattcaaaattaatattggcctg
ctggctgtgctggattccatgcaaaccatgtttgtcggagatgtaaaacgatattttacc
gattcctcgctggaagctatttcggccattatcggacaacaggaagtcgtgcataaccag
tcctactcttacgtgctgtcttccctggtatcagagcaggagcagaaggaaatttttgaa
tactggaaaaatgatcctgtcctgctggagcgtaacacattcatctcggacatttatcaa
gagttccgcgatgagcagaacccgcaaacctttttccaagccatggtagcggatttgatt
ctggaaggcatattcttttacagtacatttgctttcttttacaatttggcccgtgaccaa
aaaatgatggccaccagccagatgatctcgtatattcagcgcgacgaaaatcagcattgc
tacttctttgccgaagtgttcaagcagcttttggctgatttccctgagttgaataccaag
gaaaatacggactatgtctatcgtatgatcaaccgcgctgtggaactggaaacgaattgg
gcgcattacacgctcaaagaggttcgcggcattgacttgaacgagctgagcgattatatc
aaatacatggcaaacatgcgcctgagacttctgggtatggacaaagcatacgaaggtgta
gatgtaaactgtatgccttggatcaagccattttccgatgaagcgctgaatgcaacaaaa
acggacttttttgaagcaaaatcacgcaattatggcaaggtcggagatgacaatggattt
gacgatttgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (5)   

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