KEGG   Pseudomonas protegens Cab57: PPC_5239
Entry
PPC_5239          CDS       T03613                                 
Name
(GenBank) cyclic nucleotide-binding protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro02020  Two-component system
ppro02024  Quorum sensing
ppro02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PPC_5239
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPC_5239
   02025 Biofilm formation - Pseudomonas aeruginosa
    PPC_5239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppro03000]
    PPC_5239
Transcription factors [BR:ppro03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    PPC_5239
SSDB
Motif
Pfam: cNMP_binding HSBP1
Other DBs
NCBI-ProteinID: BAO64586
Position
5809334..5810134
AA seq 266 aa
MYLMGEQPAYADALINRLQSIPPQLLDGLAPSGPTLELGPIAELSSVLPGDQLFLLASGV
IQASVEERPLFYLHEGDLVGLRRGIELPQWQLHCDTPLQLIPYLRTEVFRHIQADVQRSE
LLVQYLIGQTALLSDAIARLKPPELRSSNGFKRVEAGERLITQGDEADHVFVILEGHAQA
FVDGHKVGDVPKDEIFGAMAVFTGEKRSASVIASEPSTIMLIPKDQFLSLTQSNPRIAHS
LIESMARRIDLLNKEVTRLMTLNNPN
NT seq 801 nt   +upstreamnt  +downstreamnt
atgtatctaatgggggagcagccggcttacgccgacgccttaatcaacagactgcagagc
attccgccgcaattgctggacgggcttgcgcccagcggcccgacgttggagcttggcccc
atcgctgagctgtccagcgtattgcccggcgaccagttgttcctgctggcaagtggcgtg
atccaggccagtgtcgaagagcggccactgttctacctgcatgaaggcgacctggtgggg
ctgcggcgcggcatcgaactcccgcagtggcaactgcactgcgatacgccgctgcaactg
attccctatctgaggactgaagtgtttcggcacatccaggccgacgtacaacgctcggaa
ctgctcgtacagtatctgatcggccagaccgccctgctctccgatgccattgcccgtctc
aagccgccagagttgcgcagcagcaacggcttcaagcgcgtggaggcgggcgaaaggctg
attacccagggggatgaggcagatcatgtgtttgtaatactcgaaggccatgcacaggcc
ttcgtcgacgggcacaaggtcggcgacgtccccaaggacgagattttcggcgccatggca
gtgttcaccggagaaaaacgcagcgccagcgtgatcgccagcgaacccagcaccatcatg
ctgattcccaaggaccagtttctcagcctgacccagagcaatccgcgcattgcccacagc
ctgatcgaaagcatggcgcgccgcatcgacctgctaaacaaggaagtgacccggctcatg
accttgaacaacccgaactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (4)   

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