KEGG   Podarcis raffonei (Aeolian wall lizard): 128407955
Entry
128407955         CDS       T09310                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010  MAPK signaling pathway
praf04020  Calcium signaling pathway
praf04510  Focal adhesion
praf04518  Integrin signaling
praf04519  Cadherin signaling
praf04540  Gap junction
praf04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:praf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128407955 (PDGFRB)
   04020 Calcium signaling pathway
    128407955 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    128407955 (PDGFRB)
   04519 Cadherin signaling
    128407955 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128407955 (PDGFRB)
   04540 Gap junction
    128407955 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128407955 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:praf01001]
    128407955 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:praf04090]
    128407955 (PDGFRB)
Enzymes [BR:praf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     128407955 (PDGFRB)
Protein kinases [BR:praf01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   128407955 (PDGFRB)
CD molecules [BR:praf04090]
 Proteins
  128407955 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set VEGFR1-3_N_Ig-like ig Ig_2 Ig_VEGFR-1-like_5th V-set C2-set_2 VEGFR-1-like_Ig-like MgpC HEF_HK Glycos_transf_2
Other DBs
NCBI-GeneID: 128407955
NCBI-ProteinID: XP_053232991
Position
2:complement(63113581..63186573)
AA seq 1084 aa
MMRLLFLKMLLFLLFFLTGLPQTSSLEISPNDQEVILSLYSDFSVICSGQNEIYWKKDSK
HVLDTGLERRDNTFISVLTLRNVTGYDTGEYSCLYKQSAEEKAIYIFVPDPSLPFVPSSQ
EDTFVFTTGHGEDIIPCRVTDPNTRVTLYEKKIDDPIPSTYFAQQGFKGYFEDTSYICRA
TLDEQEFDSETFYVYSIQVSSSPTSVINVTVSAVQTILKQGENISVTCAVRGIDLVNYTW
SYPGQKVGKEVKPWTDVGTRGSRDTSTTLTIHNAELEDEGDYICEATDTYHGQKETQSIF
IRVIEHGFVTFHTILNDTVSAELHKSHTFHVLIEAYPSPTIVWLQNNQPLTSESNSEFAI
STRNSSETKYHTTLTLVRVKQSEGGLYTVRAFHEDDLKELSFTLQINVPAKVTHLREDSN
TTSGEQTVTCITEGMPQPEVVWYTCNNAKWCDAEATKSLVNASEEMVLETNTTYRDDMKI
YIVTSKLHFHRVDEPVFLSCATQNLLGTDTQNITLVPDNLPFKVIIISVILALLVLMFIF
LVILVAVWRKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRTLGS
GAFGRVVEAIAHSLSHSQSTMRVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLL
GACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQCCSEKAKQEAEVYGNAPTEDRVQSHV
SLSVESDGGYMDMSKDESLDYVPMSVPMSDMKGEIKYVDIDASNYGTTYELDSYSPSASE
KVALINESPLLSYVDLVGISFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGL
ARDIMRDSNYISKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL
PMNEQFYNAIKRGYRMSKPTHASDEIYEIMQKCWDEKFEIRPSFSQLVVLVGNLLADSYK
KKYQQVNEEFLKSDHPAIVRTRPWNSGLNNSRSTAINSSATSGTVLYTAVEQNELDNDYI
IPLPDLKPEGANENPQEASSSRASSSLNEAHTSSTISCDSPLAPQEEEEEKQEEEEAPEL
KPDC
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgatgcgacttctgtttttgaagatgctcctcttcttgctgttctttctcacaggattg
ccacaaaccagctccctggagatttctcctaatgaccaagaagtcatcctcagtctctac
agtgatttttctgtgatatgctcagggcagaatgagatttactggaaaaaggacagcaaa
cacgtattagacactgggctggagagaagggacaacacttttattagcgtccttacactc
aggaatgtgactggctatgatacgggtgaatattcctgtctctacaaacaatcggcagag
gaaaaagccatctacatttttgtaccagacccctctttgccattcgtacctagcagccaa
gaggacacatttgttttcaccacaggccatggtgaagacattatcccatgccgtgtgaca
gaccccaacacaagagtgaccctttatgaaaagaagatcgatgacccaatccccagcact
tattttgcacaacaaggcttcaaggggtactttgaagacacgtcctacatctgcagggca
acattagacgagcaggagtttgactctgaaacattttatgtgtacagcatccaagtttca
tcttctcctacctccgtcatcaatgtcactgtcagtgctgtgcaaactattttgaaacaa
ggggaaaatatcagtgtgacttgtgcagtgagaggcattgatctggtcaattatacttgg
agttatcctggtcagaaggtaggcaaggaggtaaaaccatggaccgatgttggaacaagg
ggcagtcgcgatacgagtaccaccttaaccatccacaatgcagagctggaggatgaagga
gattatatctgtgaggccactgacacatatcatgggcaaaaagaaacacaaagcatcttt
atcagagtcattgagcatggctttgtgaccttccacactattctgaatgacacagtgtct
gctgaactgcacaaaagccacaccttccatgtgctgattgaggcgtatccaagcccaacc
atcgtttggcttcagaataatcagcccctgacttcagagagcaacagtgaatttgccatc
agcaccaggaattcctcagaaaccaagtaccatactactctaacccttgtgagggtgaaa
cagagtgagggaggtttatatactgtccgagcattccatgaagatgacttgaaagagctc
tccttcaccttacagattaatgtaccagcaaaggtgacccatttgagagaggacagcaac
acgaccagtggggagcaaacagtgacctgcatcacagaaggaatgccccagccagaggtt
gtctggtatacctgcaataatgccaaatggtgtgatgcagaagccaccaaatctctggtg
aatgcctctgaagagatggttctggaaacaaacaccacctaccgagatgatatgaagatt
tacatcgtgacaagcaagctgcacttccacagagtagatgagccggtcttcctcagttgt
gctactcaaaacctcttgggcacagatactcagaacatcaccttggtcccagacaatttg
ccctttaaagtgataatcatctcagttatcctggccttgctggtgctcatgtttattttc
ctagtgatcctcgttgctgtgtggcgaaagaagcctcgctatgaaatccgctggaaggtg
attgagtcagtcagctctgatggacatgaatatatctatgtggaccccatgcagcttcca
tatgactccagctgggaggttcccagagacaagcttgtgctaggacgcacactgggctcc
ggggcctttgggcgtgtggtggaagcaatagcccacagcctgagccactcacagtctacc
atgagagttgctgtgaaaatgcttaagtctactgccagaagcagtgagaagcaggcacta
atgtcggaactgaagatcatgagtcaccttgggcctcatctgaacattgtcaacctgctt
ggagcctgcaccaaaggaggccctatctacatcataacagagtactgtcgctatggagac
ctggtggactacttgcacaggaacaagcacaccttcctgcagtgttgcagtgagaaagcc
aagcaggaagcagaggtgtatggaaatgcccccactgaggacagggtgcagagccatgtt
tccttatctgtggaaagtgatgggggctatatggatatgagcaaggatgagtcattggat
tatgtgcccatgtcagtgcccatgtcagatatgaagggtgaaatcaagtacgtggacatt
gatgcctccaattatggtactacctatgagctagacagctattcgccatcagcttctgaa
aaggtggcgttgataaatgagtctcctcttctcagctatgtggatcttgttggaattagt
tttcaggttgccaatggaatggagttccttgcttccaaaaattgtgtgcaccgagacctg
gctgcaaggaatgtgttgatctgcgaggggaaactggtgaagatctgtgactttggtcta
gctagagacataatgcgggattcaaattacatctccaaaggcaataccttcttgccattg
aaatggatggcacctgagagcatcttcaacaacctctacactaccttgagtgatgtgtgg
tcttttggaatcctcctctgggaaatattcactctgggtgggactccatatcctgaactg
cccatgaatgagcaattctacaatgctatcaaacgcggctatcgtatgtccaagcctaca
catgcttctgatgagatctatgaaatcatgcagaaatgctgggatgagaaatttgagatc
cgaccttctttctctcaactggtggtactcgtggggaacctgctggcagacagctataag
aagaagtaccaacaagtcaatgaagaattcttgaaaagcgaccatcctgctattgtccgc
acaaggccctggaactcaggtctcaacaattccaggtccactgccatcaattccagcgcc
acctcaggcactgtcctttatacagctgttgaacagaatgaactggacaatgattacatc
attcctttgccggaccttaaaccagagggagccaatgaaaacccgcaggaggcctccagc
agtcgggcaagctcttcactgaatgaagcacacacatcgtctactatatcctgcgacagc
cctctagccccacaggaagaagaagaagaaaaacaagaagaagaagaagcaccagaacta
aagccagactgctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (21)   

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