KEGG   Pradoshia sp. D12: F7984_18165
Entry
F7984_18165       CDS       T06218                                 
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
prd  Pradoshia sp. D12
Pathway
prd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:prd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F7984_18165 (rpoE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prd03021]
    F7984_18165 (rpoE)
   03400 DNA repair and recombination proteins [BR:prd03400]
    F7984_18165 (rpoE)
Transcription machinery [BR:prd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     F7984_18165 (rpoE)
DNA repair and recombination proteins [BR:prd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      F7984_18165 (rpoE)
SSDB
Motif
Pfam: HARE-HTH
Other DBs
NCBI-ProteinID: QFK73015
UniProt: A0A5J6XS45
Position
complement(3780441..3781016)
AA seq 191 aa
MKLANLSKEEVSEMAYIEIANVLLIEKKEAIDFKVMMDKIQKLLGLTDEEVSAKMGQFYT
DLNVDGRFISIGDNRWGLKGWYPVEQVEEETVPASKVKKKKKGKKALVDDFDDEDEVLDF
DDLDDFDDDDDEDDSLIDDFDDIDDIDDDEDDDDEDLIEDEVIVEDDYDLDDEEEEEEDL
VIDEEEEDDNR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaaactagccaacctgtctaaggaagaagtaagtgaaatggcttacattgaaattgcg
aacgtgttacttatagaaaagaaagaagcaatagattttaaggtaatgatggataaaatc
caaaaattacttggtttgacagatgaagaagttagtgcaaaaatgggccaattctataca
gatctaaatgtagacggccgttttatcagtattggagacaatcgctggggactaaaagga
tggtaccctgttgaacaagttgaagaagaaacagttccagcttctaaagtgaagaagaag
aaaaaaggcaaaaaagcactcgttgatgactttgatgatgaggatgaagttcttgatttt
gatgatcttgatgacttcgatgacgacgatgatgaggatgattctttaattgatgatttc
gacgatatcgatgacatcgatgatgatgaggatgatgatgacgaggatctaatcgaggac
gaagttatcgttgaggatgattatgatcttgacgacgaagaagaagaggaagaagatctt
gtgattgacgaagaagaagaggacgacaatcgctaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3)   

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