KEGG   Prodigiosinella aquatilis: PCO85_12865
Entry
PCO85_12865       CDS       T09220                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
prod  Prodigiosinella aquatilis
Pathway
prod02020  Two-component system
prod02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prod00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PCO85_12865
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PCO85_12865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prod03021]
    PCO85_12865
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:prod02035]
    PCO85_12865
Transcription machinery [BR:prod03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PCO85_12865
Bacterial motility proteins [BR:prod02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    PCO85_12865
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 tRNA_lig_CPD HTH_23 TFIIE_alpha Asp_protease GerE
Other DBs
NCBI-ProteinID: WJV52145
Position
complement(2773337..2774059)
AA seq 240 aa
MSDLYTAEGTMDKNSLWQRYIPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
SLQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVANAMRQAEQLLGRAPTEQEV
AQALDITLQEYRQILLDTNNSQLFSYDEWREEHGDSAGALLEGNEEANPLRQLMDVSVRE
RVMEAIENLPEREKLVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRVKLMNDV
NT seq 723 nt   +upstreamnt  +downstreamnt
gtgagcgatctgtataccgccgaaggcacaatggataaaaattctctctggcagcgctat
atccccttggtgcggcacgaggctctgcgattacaggttcgtctccctgcgagcgtagag
cttgacgatctgttgcaggcgggaggtattggtctgctcaacgcagtggagcgttatgat
tcgttgcaaggcacggcatttacgacttatgccgtacagcgtatccgtggtgcgatgttg
gatgaactccggagtcgggattgggcacctcgtagtgtgcgacgtaatgctcgtgaagtg
gctaatgctatgcgtcaggctgaacagctgttaggcagggcacccactgagcaagaagtt
gctcaggctctggatatcactctgcaagagtatcgtcagatcttgttggatactaacaat
agccagctgttttcttacgatgaatggcgcgaagaacatggtgatagcgctggtgcgttg
ttggagggaaatgaagaggccaatccgctgcgtcagctcatggatgttagtgttcgtgag
agagtgatggaggcgattgaaaatttgccagagcgtgaaaagctggtgctgactctttat
taccaggaagaactgaatctgaaggaaatcggtgctgttctggatgttggggagtcacga
gttagccagttgcatagccaggcgataaagcgtctgcgtgtaaaattaatgaacgatgtt
taa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (10)   

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