KEGG   Prosthecochloris sp. GSB1: CHL67_00085
Entry
CHL67_00085       CDS       T04996                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pros  Prosthecochloris sp. GSB1
Brite
KEGG Orthology (KO) [BR:pros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pros03032]
    CHL67_00085 (gyrB)
   03400 DNA repair and recombination proteins [BR:pros03400]
    CHL67_00085 (gyrB)
Enzymes [BR:pros01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CHL67_00085 (gyrB)
DNA replication proteins [BR:pros03032]
 Prokaryotic type
  DNA Topoisomerases
   CHL67_00085 (gyrB)
DNA repair and recombination proteins [BR:pros03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CHL67_00085 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c Toprim_4 HATPase_c_3
Other DBs
NCBI-ProteinID: ASQ89548
UniProt: A0A222SEX5
Position
complement(19059..20996)
AA seq 645 aa
MSETQSSTPNAPTYAATNIQILDGIQHVRKRPAMYIGDVHSRGLHHLIYEIVDNSIDETL
AGYNDIIDLSLNEDGSVTVTDNGRGIPVDIHPEKKKSALELVMTVIGAGGKFDKGAYKVS
GGLHGVGASVVNALSEWCEVEVSRDGKIWFQRYHQGVPQCEVQAIGETDKTGTKTSFKPD
ASIFKNTEFRKDVIIDRMRELAFLNSQLKIVVRDTEGVEDIFHFEGGISEFVKYTDHNRI
SLVKEPVFISGERDTTMVEIALQYNDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLN
ASAQKNDLLKNLKISLSGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESIVN
EHLADYLESNPGVLKTVIEKVKGAALSREAARKAKELTRRKSALESSGLPGKLADCSIND
PEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILAL
GTSFGVDEFAVDKLRYGKIIIMTDADVDGAHIRTLLLTFFFRHMRELIEAGKVFIAQPPL
YLVKSGRDQRYAWDDDERTSIIESMKKQQKGKASVSVQRYKGLGEMNPEQLWNTTMDPEH
RSLLQVTVENAMEADQIFSTLMGDKVDPRRDFIEKNARYVRRLDV
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgtcagaaacgcagagttcaacccccaacgccccgacgtacgcagcaaccaatatccag
attctcgacggcatacagcatgtcaggaaacgcccggccatgtatatcggcgacgtccat
tcacgcggactgcaccatcttatttacgagatcgtcgacaactcgatcgacgaaacgctc
gcgggctacaacgacatcatcgacctgtccctcaacgaagacggttcggtcacggtcacc
gacaacggcaggggtattcccgtcgatatccatcctgaaaagaaaaagtcggccctcgaa
ctcgtcatgacggtcatcggggccggcggaaagttcgacaagggcgcctacaaggtatcg
ggcggcctgcacggcgtgggcgcttccgtggtcaacgccctttcggaatggtgcgaggtc
gaagtgtcccgcgacggtaaaatatggttccagcgttaccaccagggagtcccccagtgc
gaggtgcaggccatcggagagacggacaaaaccggcacgaaaacctcgttcaagcctgac
gcatcgatcttcaaaaacactgaattccgtaaggacgtcatcatcgaccgcatgcgtgag
ctggcttttctcaacagccagttgaaaatcgtcgtccgcgataccgagggcgtcgaagac
atttttcatttcgagggcggcatcagtgaattcgtcaaatacaccgaccacaaccgcatc
agcctcgtcaaggagcccgtcttcatcagcggtgaacgcgacacgacgatggtcgagatt
gcccttcaatacaacgactcctaccaggaaaacgtcttcagctacgtcaacaacatcaat
acccacgaaggcggtacgcacgtcacgggtttccgcaaggcgctgacccggacgctcaac
gcctcggcgcaaaaaaacgacctgctgaagaacctgaagatatccctcagcggagacgat
ttcaaggaaggcctgacagccgtaatctcggtcaaggtcgccgaaccgcagttcgaagga
cagacaaagaccaagctcggcaactccgagacccagagcatcgtcgaaagcatcgtcaac
gaacacctcgccgattatctggaaagcaaccccggcgtcctgaaaaccgtcatcgagaag
gtcaagggagcagcgctgtcgagagaagccgcaagaaaggcgaaagagctgacccgccgc
aagtccgcgcttgaaagctccggactgccaggcaagctggcggactgctcgatcaacgat
cctgaacactgcgaactctacatcgtggagggagactcggcgggcggcagcgccaaacag
ggccgcgaccgcagtttccaggctatccttcccctgaaaggaaagattctgaacgtcgag
aaagcccggctgcacaagatgcttgaaaacgaagagatcaaaaccatcattctcgctctc
ggcacgagcttcggagtagacgaattcgccgtcgacaagctgcgctacggcaagatcatc
atcatgaccgacgccgatgtcgacggcgcgcacatccgcacgctgctgcttaccttcttc
ttccgccacatgcgggagttgatagaggccggaaaggtcttcatcgcccagcccccgctc
tatctcgtcaagagcggcagggaccagcgctatgcgtgggacgacgacgaacggacgagc
atcatagaatcgatgaaaaaacagcagaaaggaaaggccagcgtttccgtccagcgctac
aaagggctcggtgaaatgaaccccgaacagctctggaacacgaccatggatcccgagcac
cgctcactgctccaggttacggtcgaaaacgccatggaagcggaccagatcttctcgacc
ctcatgggcgacaaggtcgatccgcgccgcgactttatcgaaaagaacgcccgctacgtg
cgcaggttagacgtctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (9)   

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