KEGG   Pseudomonas sp. Stari2: NH234_01960
Entry
NH234_01960       CDS       T10554                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt02020  Two-component system
psdt02024  Quorum sensing
psdt02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NH234_01960
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NH234_01960
   02025 Biofilm formation - Pseudomonas aeruginosa
    NH234_01960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psdt03000]
    NH234_01960
Transcription factors [BR:psdt03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    NH234_01960
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 HTH_24 MarR HTH_23 Sigma70_r4 WHD_RecQ_mid_bact
Other DBs
NCBI-ProteinID: XCY00690
Position
444759..445442
AA seq 227 aa
MDRVWRERLLTGQWFSHLPLSFQDSLLAAAKERRLAAGQRLFQRGDAPCGLYAVLDGAVR
IGAVSEQGKEALLSLVEAPHWFGEICLFDGQPRTHDAYAVGPCLLLNIPQATLLKLLDEH
PVYWRHLALLMSHKLRLTFINLEQLSLLPAPARLAHRLLMIAEGYGELDPPRRVLQLPQE
QLASMLSLSRQTTNQILKDLQGQGIIGLAYGEIEILDAVRLRALAVV
NT seq 684 nt   +upstreamnt  +downstreamnt
atggatagggtctggcgcgagcgcctgctgaccgggcaatggttcagtcatctacctttg
tcttttcaggatagtctgctggcggcggccaaggagcggcggctggcggcggggcagcgg
ctgttccagcgcggcgatgcgccgtgcgggctgtacgcggtgctcgacggcgcagtgcgc
atcggcgcggtcagcgagcaaggcaaggaggcgttgctgagtctggtggaggcgccgcac
tggttcggcgaaatctgcctgttcgacggccagccccgcacccatgatgcttacgcggtc
ggcccgtgtctgttactgaatatcccgcaagccacactgctgaaactgctcgacgaacac
cccgtttactggcgacatctggcgttgttgatgagccacaaactgcgcctgaccttcatt
aatctcgaacagctgagcctgctgccggccccggcgcgtctggcccatcgcttgctgatg
atcgccgaaggctacggcgaactcgacccgcctcgccgggtgctgcaactgccccaggag
caactggcgtcgatgctgtcgctgtcgcggcagaccaccaaccagatcctcaaggatctg
caggggcaggggattatcgggttggcttacggggagatcgagatccttgatgccgtccga
ttgcgggctttggctgtcgtatga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system