KEGG   Pseudomonas sp. Stari2: NH234_08290
Entry
NH234_08290       CDS       T10554                                 
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt02020  Two-component system
psdt02024  Quorum sensing
psdt02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NH234_08290
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NH234_08290
   02025 Biofilm formation - Pseudomonas aeruginosa
    NH234_08290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psdt03000]
    NH234_08290
Transcription factors [BR:psdt03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    NH234_08290
SSDB
Motif
Pfam: cNMP_binding LpxB
Other DBs
NCBI-ProteinID: XCY01907
Position
complement(1795273..1795746)
AA seq 157 aa
MSEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFREGDAGSFMCII
HTGQVAVQKTGADGQVITMATLRSGRAFGEMAVLDGERRSATCVAASNCQLLNLGKDSLE
KMLNDAPKIAAKIIRALAVSLSKRLRMADGQLAAQQI
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcagaaccaactctactgaacaacgaaatccgcgactggctgatggactgcggcctg
ttcgatcaattgcaactggcggatttcgccgccgcttcgggctacttcagcatcagcacc
gtagctgaaggcgaagcgatcttccgcgaaggcgatgccggcagcttcatgtgcatcatc
cacaccggccaggtggccgtgcagaagaccggggctgacggccaggtcatcaccatggcc
accctgcgcagcggccgggccttcggtgaaatggccgtgctcgatggcgaacgccgctcg
gcgacttgcgtggcggcgagcaactgtcagttgctcaacctgggcaaggattcactggaa
aaaatgctcaacgacgcgccgaagatcgccgccaagatcatccgcgccctcgccgtctcc
ctgtccaaacgcctgcgtatggccgacggccaactggcggcgcagcagatctag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (3)   

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