KEGG   Polypterus senegalus (gray bichir): 120529553
Entry
120529553         CDS       T08668                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04145  Phagocytosis
psex04517  IgSF CAM signaling
psex04540  Gap junction
psex04814  Motor proteins
psex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120529553
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    120529553
  09144 Cellular community - eukaryotes
   04540 Gap junction
    120529553
  09142 Cell motility
   04814 Motor proteins
    120529553
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120529553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psex03036]
    120529553
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120529553
   04147 Exosome [BR:psex04147]
    120529553
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120529553
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120529553
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120529553
  Exosomal proteins of colorectal cancer cells
   120529553
  Exosomal proteins of bladder cancer cells
   120529553
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 120529553
NCBI-ProteinID: XP_039609381
Position
5:complement(144900130..144910152)
AA seq 445 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYNGDCDLQLERISVYYNDVADNKYV
PRAILVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGSELVDSVIDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNSFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPAFAPLTSQGNQQYHALTVSELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVDDQCEFEEDEGEDEM
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgttcacatccaggctggtcaatgtggaaaccagattggagcaaagttt
tgggaagtgatcagtgatgagcatggtatagaccccactggcagctacaatggggattgt
gacctgcagctggaaaggatcagcgtctactataatgatgttgccgataacaaatatgtg
ccccgtgccattcttgtggacttggaaccaggaacaatggattcagtcaggtctggacct
tttgggcagcttttccgtcccgataactttgtatttggtcagagtggtgctggcaataac
tgggcaaagggtcattatacggaaggttcggagttagtggactctgtcattgatgtggtg
agaaaagaggcagagagctgtgactgtctgcagggattccagctcacccactcccttggc
ggagggactggttctggtatgggcactctgctaatcagcaaaattcgagaagaatatcct
gaccgcataatgaattctttcagtgtcatgccatctcctaaggtttcagacactgtggtt
gaaccttacaatgcaacactctctgtgcatcagctggtggagaacactgatgagacctac
tgcatcgataatgaggctttatacgatatttgctttcgtactctcaagttggccactcct
acttatggagacctcaatcacctggtatcagctaccatgagtggtgtcaccacctgtctt
cgctttcctggtcaactaaacgcagatttacgcaaactagcagttaatatggtgcctttc
ccacgacttcatttctttatgccagcttttgcaccactgactagccagggaaatcaacag
tatcatgccttaaccgtgtcagagcttactcagcaaatgtttgatgcaaaaaacatgatg
gcagcatgcgatccgcggcatggaagatacctgactgtggctgcaattttcaggggcaga
atgtctatgaaagaagttgatgaacagatgctcaatgtccagaacaaaaatagcagttat
tttgtagaatggattcccaataatgtgaaaacagctgtctgtgacatcccaccacgaggc
ctcaaaatgtctgctaccttcattggcaatagcactgcaatccaggagctttttaagaga
atatctgaccagttcacagctatgttccgcaggaaagccttcttacactggtatactggt
gaaggtatggatgaaatggaattcacggaggctgaaagcaacatgaatgacttggtctct
gagtatcagcaatatcaggatgcaactgtagatgatcagtgtgaatttgaggaggatgag
ggagaagatgaaatgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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