KEGG   Pseudomonas sp. HS6: JJN09_05840
Entry
JJN09_05840       CDS       T09971                                 
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
  KO
K12685  subtilase-type serine protease [EC:3.4.21.-]
Organism
pshs  Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:pshs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pshs02000]
    JJN09_05840
   02044 Secretion system [BR:pshs02044]
    JJN09_05840
Transporters [BR:pshs02000]
 Other transporters
  Pores ion channels [TC:1]
   JJN09_05840
Secretion system [BR:pshs02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   JJN09_05840
SSDB
Motif
Pfam: Autotransporter Peptidase_S8 PATR VacA_C
Other DBs
NCBI-ProteinID: UQS16383
Position
complement(1277886..1280972)
AA seq 1028 aa
MKNNNTPAQSGGCFRLKTLNRALLCALATWGSAHAAPYVENGRAGDAASWRSAEFKADWG
LGAIGADYAYAAGYTGKNVKLGIFDQPVYAAHPEFSGTNKVVTLVTSGIREYTDPYIPVK
AGDAFRYDGSPSVGSDGKLGAHGTHVGGIAAGSRDGGPMHGVAFGAQIISADNGDPGPED
GIVRGNDGAVYKAGWDALIASGARIINNSWGIGITDRFDLGGRNPAYPHFTVNDAQVQFN
EIRTLLGTKPGGAYDGAIAAARSGIVTIFAAGNDYNLNNPDAIAGLGYFVPDIAPNWITV
AALQRNPDQASSNPYIMSTFSSRCGYTASFCVSAPGTQIYSSIISGTNADNLTTGYKNYN
GTSMAAPHVAGSMAVLMERFPYMSGDQVASVLRTTATDLGAPGIDALYGWGMINLRKGID
GPAMFVTEQDIPEEFRIQGAYGSGQFVADLPGIGAIIDAGKPTQRVCTDITCGLDTWRND
ISGHGGLTKQGIGTLVMTGANTYTGPTLVNQGRLAINGSLQSAVTVNDGGILGGNGRIAA
LTANSGGIVAPGNSIGTLNVAGDVTFVPGSTYAVEVSPTSSDRIIAGGKAVIEGATVTMS
LENSPTLLTTGEVKSLLGTQFNILQAAGGIEGQFGQVLPDYAFLGGTLAYSASGVQLDVG
RNGASFASVGLTPNQRAVGAAAERLGAGNALFETLLLSPTAAVAQDAFQQLSGEIHPAIG
TMLINDSHYLRDAVGERLRERDLFDAGAPTDDRSNAWLKVLGAWGKSDGGYKNADSNSSI
SGLLAGVDGLIAEDTRLGFVTGYSDSSLSMGKGTHSSASADSYHLGAYLGHQIDALRLTA
GAAYSWHRIDVKRDLQFAGVSGKQKTKRDATTGQLFTEAAYDLGLQPMNLEPFANLAYVH
LNSDSFTEKGDAAALKGGEDNRDAVLSTLGVRAKRTFALSDKHQLELGATLGWQHNLSSV
DSDSHLAFVNGNSAFTVQSVSMDRDAAVVGVRAGLALNRDVRVNLDYNGLIGSNEKDHGV
GLTLDWQF
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaaaaataacaacacccccgcgcaatcgggtggctgctttcgcctgaaaactctcaat
cgcgccttgctttgcgccttggccacctggggtagcgcacacgctgcgccctacgtggaa
aacggccgggcaggggatgccgccagttggcgcagcgccgagttcaaggcggattggggc
ctgggtgccatcggcgcggactacgcctatgccgccggttacaccggcaaaaacgtgaaa
ctgggcatcttcgaccagccggtgtacgccgctcacccggagttttccggcacgaacaaa
gtcgtgaccctggtcaccagcggcattcgcgaatacaccgacccgtacatcccggtcaaa
gccggggacgcgttccgttatgacggttcgccctcggtcggttccgacggcaagcttggc
gcccacggcacacacgttggcggtatcgccgccggcagccgtgacggcggcccgatgcac
ggtgtggcgttcggtgcgcagatcatcagcgccgacaacggcgacccgggcccggaagac
ggcattgtgcgcggcaacgatggcgcggtgtacaaggccggctgggatgcgctgatcgcc
agtggcgcgcggatcatcaacaacagctggggcatcggcatcaccgaccgtttcgacctc
ggcggccgtaacccggcgtacccgcatttcaccgtcaacgacgcacaggtgcagttcaac
gagatccgcacactgctcggcaccaaacccggcggcgcctacgacggcgctatcgccgcc
gcgcgtagcggaatcgtgacgattttcgccgcaggcaacgactacaacctgaacaacccg
gacgccatcgccggcctcggttacttcgtgccggacatcgcgccgaactggatcaccgtc
gccgcgctgcaacgaaacccggatcaggccagtagcaatccgtacatcatgagcacgttc
tcttcgcgctgcggctacaccgcgagtttctgcgtctcggcaccgggcacgcagatctat
agctcgatcatcagcggcaccaatgccgacaacctgaccacgggctacaaaaactacaac
ggcacctcgatggccgcgccgcatgtggccggttccatggcggtgttgatggagcgcttc
ccgtacatgtctggtgatcaggtcgccagcgtgttgcgcaccaccgccaccgacctcggc
gcaccgggcatcgacgccctgtacggctggggcatgatcaacctgcgcaagggtatcgac
ggcccggcgatgttcgtcaccgagcaggacattcccgaagagttccgcatccagggcgcc
tatggctccggccagtttgtggcggacctgccaggcatcggcgcgatcatcgacgccggc
aagcccacccagcgtgtgtgcactgacatcacctgcgggctcgacacctggcgcaacgac
atttccggtcacggtggcttgaccaagcaaggtataggcaccctggtgatgaccggcgcc
aatacctacaccggcccgaccttggtgaatcaggggcgactggcgatcaatggctcgctg
caatcggcggtcacggtcaacgacggcggcatccttggcggtaacggacgcattgcggcg
ctgaccgcgaacagcggcggtattgtcgcgccgggcaactccatcggcaccttgaacgtg
gccggtgacgtgaccttcgtgccgggttcgacctatgcggtggaagtgtccccgaccagc
agcgaccgcatcatcgccggtggcaaagcggtgatcgaaggggcgacggtaaccatgtcg
ctggaaaacagcccgacgctcttgaccacgggtgaagtgaaaagcctgcttggcacacag
ttcaacatcttgcaggcagcaggcggcattgaagggcagttcggacaagtgttgcccgac
tacgcgttcctcggcggcaccctggcttactcggcgagcggtgtgcaactggacgtcggg
cgtaacggcgcgtcgttcgccagtgtcggcctgaccccgaaccagcgtgctgtcggtgcg
gccgccgaacgtctgggcgcgggcaatgcgttgttcgaaaccctgctgctgtcgccgact
gccgctgtcgctcaggacgctttccagcaactgtccggcgagattcacccggccatcggc
acgatgctgatcaacgacagccattacctgcgcgatgccgtgggtgaacgcctgcgcgag
cgcgatctgttcgacgccggtgcaccgaccgatgaccgcagcaacgcctggctcaaagtg
ctgggtgcctggggcaagagtgatggcggctataaaaatgccgactccaacagctccatc
agcggtttgctggccggtgtcgacggtttgatcgctgaagatacccgtctgggtttcgtt
actggttatagcgacagctcgctgagcatgggcaaaggtacacattcgtcggcatcggcc
gatagttatcacttgggtgcgtacctggggcatcagatcgatgcgctgcgcctgaccgcc
ggtgcggcttacagctggcatcgcatagacgtcaaacgtgatctgcaatttgccggcgtc
agcggcaagcagaagaccaaacgcgatgcgactaccgggcaactgttcacggaagcggca
tatgacctgggcctgcaaccaatgaacctggagccgttcgccaacctggcctatgtgcac
ctcaacagtgacagcttcaccgagaagggtgatgccgccgcactgaagggcggtgaagac
aaccgcgatgctgtgctgtcgaccctcggcgttcgcgccaagcgcacgtttgccctgtcg
gacaaacatcagcttgaactgggcgcgacactgggctggcagcacaacctgagcagcgtg
gattccgacagccacttggccttcgtcaatggcaacagcgcgttcaccgtgcaaagtgtg
tcgatggatcgagatgcagcggtggtcggcgtacgcgccgggctggcgctgaatcgcgat
gtccgggtgaacctggactacaacggactgatcggctccaacgagaaggaccacggtgtg
ggcctgacgctggactggcagttctaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (5)   

Download RDF
DBGET integrated database retrieval system