KEGG   Phocoena sinus (vaquita): 116753087
Entry
116753087         CDS       T07759                                 
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 3-like
  KO
K18584  actin-related protein 3
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04144  Endocytosis
psiu04517  IgSF CAM signaling
psiu04530  Tight junction
psiu04666  Fc gamma R-mediated phagocytosis
psiu04810  Regulation of actin cytoskeleton
psiu05100  Bacterial invasion of epithelial cells
psiu05132  Salmonella infection
psiu05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    116753087
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116753087
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116753087
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    116753087
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    116753087
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116753087
   05135 Yersinia infection
    116753087
   05100 Bacterial invasion of epithelial cells
    116753087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116753087
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116753087
   04147 Exosome [BR:psiu04147]
    116753087
Membrane trafficking [BR:psiu04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    116753087
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     116753087
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116753087
  Exosomal proteins of other body fluids (saliva and urine)
   116753087
  Exosomal proteins of bladder cancer cells
   116753087
SSDB
Motif
Pfam: Actin MreB_Mbl
Other DBs
NCBI-GeneID: 116753087
NCBI-ProteinID: XP_032486476
Position
4:complement(60299313..60300369)
AA seq 348 aa
MAGWLPACVGDCGTGYTKLGYAGNTEPRFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDS
FTDDEAIEKSTYATKWPIRRGIVEDRDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTARQVGERTLTGTVIDSGDGVTRVIPV
AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKESYSYVCPDXNK
YDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFTNPDFTQPISEVVEEVI
QNCPIDVRRSLYKNIVLSGGSTMFRDVRCRLQRDLKKTVDARLKLSEN
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggcgggatggctgccggcctgtgtgggggactgtggcacagggtatacaaaactagga
tatgctggaaatacggaaccacggtttatcatcccttcctgtattgctattaaggagtca
gcgaaagtgggtgatcaagcacaaaggagggtgatgaaaggtgttgatgacctagactcc
ttcactgatgatgaagcaatagaaaaatctacatatgcaacaaagtggccaatccgccgt
ggtatagttgaagaccgggacttgatggaaaggtttatggagcaagtgatctttaaatat
ttaagggcggaacctgaagaccattattttcttttgactgaacctccactgaatactcca
gaaaacagggaatatactgctgaaataatgtttgagtccttcaatgttccaggcttgtac
attgctgtacaggctgttcttgccttagctgcatcctggaccgccagacaagtaggagaa
cggacgctgaccggtacagtaatagacagtggagatggtgtcactcgtgtcatccctgtg
gctgaagggtatgtgatcggcagctgtattaagcacattccaatcgcaggacgagatata
acgtattttattcagcaattgctgagagaccgagaagtaggaattcctccagagcaatcc
ttggaaactgctaaggcagtaaaggagagctatagttatgtctgcccagatnntaacaag
tatgatacagatggatcaaagtggattaaacagtatactggaatcaatgctatctcaaag
aaagaattttccattgatgttggatatgagagattcttgggacctgaaattttttttcat
ccagagtttactaatccagactttactcagcctatctcagaagttgtagaagaagtaatt
cagaattgtcctattgatgtcagacgttctctctacaagaatattgtcctctctggaggt
tcaaccatgttcagggacgtcagatgtcgcttgcaaagagatttgaaaaaaactgtagat
gccaggctgaaattaagtgagaattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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