KEGG   Phocoena sinus (vaquita): 116754301
Entry
116754301         CDS       T07759                                 
Name
(RefSeq) LOW QUALITY PROTEIN: catenin alpha-1-like
  KO
K05691  catenin alpha
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04390  Hippo signaling pathway
psiu04519  Cadherin signaling
psiu04520  Adherens junction
psiu04670  Leukocyte transendothelial migration
psiu05100  Bacterial invasion of epithelial cells
psiu05200  Pathways in cancer
psiu05213  Endometrial cancer
psiu05226  Gastric cancer
psiu05412  Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    116754301
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    116754301
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    116754301
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    116754301
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116754301
  09162 Cancer: specific types
   05226 Gastric cancer
    116754301
   05213 Endometrial cancer
    116754301
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    116754301
  09166 Cardiovascular disease
   05412 Arrhythmogenic right ventricular cardiomyopathy
    116754301
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116754301
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     116754301
SSDB
Motif
Pfam: Vinculin
Other DBs
NCBI-GeneID: 116754301
NCBI-ProteinID: XP_032488706
Position
5:complement(139699909..139702647)
AA seq 875 aa
MTAVHADNINIKQDPKSLEIRTLAVERLLEPLVTQVTTLVNTNSKGPSNKKXGRSKKAHV
WAASVEQATDNFLEDRDKIAKESQFLKEELVAAVEGVRKQGDVMESAAGEFVGGPSSPAT
RGNAVRAARALLSGVTRLLNLPDVTDAYKLLVQLKVVEDGILKLGNAGTEQDLGIQYKAL
EPEVDKLNIMAAKRQQERKDMGHCDPMAAARGILQKNVPILYTASQACLQHTDVAACKAS
RDLIYKQLREAVTGVSSAAQATESDDASQHQGREGGELACALNNFDKQIIVDPLSFSEER
FRPSLEGRLQSVISGAALMADSSCTRDDRRERVVAECNAVRQALQDLLSQYVGNAGRKEG
SDALNSAVDKMTKKTTDLQRQLRKAVTDHVPDSFLETSVPLLVLIEAAKNGNKKEVKEXA
RVFRERADKLTEVINAALALAAKPWSKLAQENMDPFKEQWKKQVRGLTDDVNDITSIDDF
LAVSENHILRDVNKCVIALHEKDADGMYRTAGATRGRAARVIHVVTSETDTYEPGVYTEK
VLEATKLLSNTVMPHFTEXNEAAVEALSSDPAQPMEEKEFTDASRLVYDGIRDIRKALLM
IRTPEELDDSDFETEDFDVRSRTSVRTEDDQLMAGQSAQATMALLPQEQKAKTAEQVASF
QEEKSKLDAEVSKRVDRGNDVIVLAKQMCVITMEMKDFTRGKGPLKNTSAVSSAAKKIAE
AGSWMGKPGRTVADHCPDSACKRRLLFYLQCIVLYCHQLSICSKVKAEVQNLAGELVVSG
VDSATSLIQAAKNLMNAVVQTVKVSCAASAKYXKSQGRASRNLPAASWKMKVPEKKPLVK
RETQDETQTKIKRASQKKHVNPVQALSEVKAVDSI
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgactgctgtccacgcagacaacataaacatcaaacaagaccccaaaagtctagagatc
aggactctcgcagttgaaagactgttggagcctcttgttacccaggttacaaccctggtc
aataccaatagcaaggggccctctaataagaagtgaggtcgttctaagaaggcccacgtt
tgggctgcatctgtcgaacaagcaacggacaatttcttggaggacagggataaaattgca
aaggagagtcagtttctcaaggaggagcttgtggctgctgtagaaggtgttcgaaaacaa
ggagatgtgatggagagtgctgctggagagtttgtgggtggtccctcttctcccgcgacg
cgtggcaacgcggttcgggcagctcgagctttgctctctggtgttacccggctgcttaat
ttgcctgacgtgacagatgcctacaagttacttgttcagctgaaagttgtagaagacggt
atcttgaaactggggaatgctggcaccgaacaggacttgggaatacagtataaggccctg
gaacctgaagtggataagctgaacattatggcagccaaaagacaacaggaacggaaagat
atgggccattgtgatccgatggctgcagccagaggaatcctgcagaaaaacgttccaatc
ctctatactgcatcccaggcatgcctacagcacactgatgtcgcagcctgtaaggccagc
agagacctgatatacaagcagctgcgggaggcggtcacaggcgtttctagtgcagcccag
gctactgaatcagacgacgcctcccagcaccagggtcgagaaggaggagaactggcgtgt
gccctcaataactttgataaacaaatcattgtggaccccttgagcttcagcgaggagcgc
tttaggccttccctggaggggcgcctgcaaagcgtcattagtggggctgccctgatggct
gattcatcctgcacacgtgatgaccggcgtgagagagtcgtggccgagtgtaatgctgtc
cgccaggccttgcaggacctgctctcacagtacgtgggcaacgctgggcgtaaagaaggg
agtgacgcactcaattctgcagtagataaaatgaccaagaagaccacggacttgcagagg
cagctccgcaaagctgtcacggaccatgttccagattcatttctggaaaccagcgttcca
cttttagtattgattgaagctgcgaagaatggaaacaagaaagaagttaaagaanatgcc
cgagttttccgggaacgtgccgacaaattaactgaggttatcaatgctgcgttggcttta
gcagcaaaaccatggagtaaactggcccaagagaacatggatccttttaaagaacagtgg
aaaaaacaagtccgaggtctcacagatgatgtcaatgacattacttccattgatgacttc
ctggctgtctcagagaatcacattttgagagacgtgaacaaatgcgtcattgctctccat
gagaaagatgcggatgggatgtaccgcacagctggtgcaactcgaggccgagctgctcgg
gtcattcacgtggtcacctcagagacggacacctatgagccaggggtctacacagagaag
gttctggaagccaccaaactcctctccaacacagtcatgccacattttaccgagntaaat
gaagcggccgtggaagccctcagctcggacccggcccagcccatggaggagaaggagttt
actgacgcctcacgcctggtgtacgacggcatccgggacatcaggaaagcgctgctgatg
ataaggacccctgaggagctggatgactcggacttcgagacagaagacttcgatgtcaga
agcaggacaagcgtccggacggaagacgatcagctgatggctggccagagtgcccaggcg
accatggctctccttccccaggagcaaaaagcaaagactgcggaacaggtggccagtttc
caggaagaaaagagcaagctggatgccgaagtgtccaagcgggtcgaccgaggtaatgac
gtcatcgtgctggccaagcagatgtgcgtgatcacgatggagatgaaggactttacccga
ggtaaaggaccgctcaaaaacacatcggctgtgagcagtgccgccaagaaaattgctgag
gcgggatcctggatgggtaagcctggccgtacggtcgcagaccattgcccagactcagcc
tgcaagaggcgcctgctgttctacctgcagtgcatcgtcctctactgccaccagctcagc
atctgcagcaaagtcaaggctgaggtgcagaacctcgctggggagctggtcgtctccggg
gtggacagcgccacgtccctgatccaagccgctaagaacttgatgaacgcggtggtgcag
acagtgaaggtgtcctgtgcagcctccgccaaatactagaagtctcaggggagggcttcc
cgtaacctccctgctgcgtcatggaagatgaaggtgcctgagaaaaagcccttggtgaag
agagagacacaggatgagacacagaccaagattaagagggcatctcagaagaagcacgtg
aaccctgtgcaggccctcagtgaggtcaaagccgtggacagcatctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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