KEGG   Phocoena sinus (vaquita): 116756861
Entry
116756861         CDS       T07759                                 
Symbol
CWC22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116756861 (CWC22)
Spliceosome [BR:psiu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    116756861 (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    116756861 (CWC22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1
Other DBs
NCBI-GeneID: 116756861
NCBI-ProteinID: XP_032493791
Ensembl: ENSPSNG00000006006
UniProt: A0A8C9BJH2
Position
7:54008914..54071303
AA seq 901 aa
MKSSVAQIKHSSSHDRRENYNSYQRTSSPEDRYTEQERSPRDRDYFDYSRSDYEHSRRGR
SYDDSMESRSRDREKRRERDVDRKRSRKSPSPGRRSPEPLVTQSSSVQDEPTAKKKKEEL
DPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNIGIII
QELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFR
KGYRRNDKPLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGL
KLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVVLEGLDLVEE
EDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQDAGSS
EEEEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFP
EGQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETN
KLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNGR
LKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNIPKVIVAQKPDVE
PNKSPASSSSPESSSSESDSSASDSDSSDSSSETSSGESASSSASSQSSASDKDVRKKGQ
GNHRRKEVNKLIRKQHTNDRKQEERRPEQRHQETRTERERRSEKPRDRDSKDPVTKYTSD
RGLPSERNSYSRAMKDRDQEMYMDLEHNLGDPRKKRGERRNSFSENEHKYRNKDSENFRR
KDRSKSREKDKKHSASRSDEDRYQNGAERRWEKSSRYSEQSRESKKNQDRRREKSPTKQK
K
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgaaaagtagcgtggcacaaataaagcattcttctagtcatgacagaagggaaaactat
aattcatatcagaggacctcctctccagaagacagatacacggaacaagaaagatcccct
cgggatagagattactttgattacagcaggtcagactacgagcattcaagaagaggacgt
tcttatgatgatagcatggagtcacgaagtagagaccgagaaaaacgcagagaaagagat
gtggatcggaaaaggtcccggaaatctccatctcctgggagaagaagcccagaaccattg
gtaacccagagttcctctgttcaggatgaacctactgcaaagaagaagaaagaggagctg
gatcctcttcttactcgcactggtggagcatatattcctcctgcaaagctcaggatgatg
caagaacagattacagataaaaacagcttagcataccagaggatgagctgggaagcccta
aagaagtccatcaatggtctgatcaacaaagtcaacatttccaatattggaattattatt
caagaacttcttcaagaaaatatagttagaggaagaggcctgctatccagatctgttttg
caagcacagagtgcttctccaatcttcacccatgtttatgcagcattagtggcaattatc
aactcaaaatttccacaaattggagaattaatcctcaaaaggttaattcttaattttcga
aaaggctatcggagaaatgataagccactttgtctgacagcttcaaaatttgtggcacat
cttattaaccaaaatgtggctcatgaagttttatgcttagaaatgctcactttgctcctg
gaaagaccaacagatgatagtgttgaagtagctattggttttcttaaggaatgtggtctc
aaattaacacaagtgtcaccaagaggaatcaatgctatatttgaacgtcttcgaaacatt
ctccatgagtctgaaattgacaaaagagttcagtatatgattgaagtgatgtttgctgta
aggaaggatggattcaaggaccaccctgttgttctagaaggacttgacttagtggaagaa
gaagatcagttcacccatatgctccctctggaagatgactataatccagaagatgttctt
aatgttttcaagatggatcctaattttatggagaatgaagagaagtacaaagctattaag
aaggaaattcttgatgaaggagatagtgactcaaacacagaccaagatgctgggagtagt
gaagaagaggaggaagaagaggaggaagagggagaagaagatgaagaaggacaaaaggtg
actattcatgacaaaacagaaattaatctagtctcatttcgtcgtacaatttatcttgct
attcagtcaagtttagattttgaagagtgtgctcacaaattgctgaaaatggagtttcct
gagggtcaaacaaaagaactgtgcaacatgatacttgactgctgtgcccaacaaaggaca
tatgagaaattttttggcttattagctgggcgattttgcatgctaaaaaaagaatacatg
gaatcctttgaaagtatattcaaagaacaatatgataccatccatcgcttggaaacaaac
aaattgagaaatgttgctaagatgtttgctcacctcttatacaccgattcacttccatgg
agcgttcttgaatgcataaagctgagtgaagaaaccactacatcatccagtagaattttt
gtgaaaatatttttccaagaactgtgtgaatacatgggtcttcctaaacttaatggaaga
ttaaaggatgaaactctgcagccattctttgaaggattattaccccgagataacccaaga
aacactcgatttgccatcaacttctttacttctataggtcttggaggtttaacggatgaa
ttgcgtgagcatctcaaaaatataccaaaggtcatcgtggcacaaaaaccagatgttgag
ccaaataaatcccccgcctcctcttcctcccctgagtcctcctcctctgagtctgactcc
tctgcctctgattcggacagcagcgacagcagttcagagacttctagtggagaaagcgct
tcttcatccgccagtagtcagagctcagcctcagataaagatgtaagaaagaaggggcaa
gggaaccacagaaggaaagaagtaaataaattgatcaggaaacaacacacgaatgatagg
aaacaagaagaaaggagaccagagcaacggcaccaggaaacgaggaccgagagagaaagg
aggtcagagaaacccagagacagagattcaaaagatcccgtaacaaagtacacttcagac
agagggcttccttctgagcgaaacagctacagcagagccatgaaggacagagaccaagaa
atgtacatggatttggaacataatcttggggatcccagaaagaaaagaggagagagaaga
aattctttctctgaaaatgagcacaaatacagaaataaggacagtgagaattttagaaga
aaggataggtccaagtcaagagaaaaggataaaaaacattcagcctctagaagtgatgaa
gacaggtatcagaatggtgctgagagacgatgggaaaaatctagccgatactctgaacaa
tccagagaatcaaagaaaaatcaggaccggcgaagagaaaagtctccaacaaagcaaaaa
aaataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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