KEGG   Polyodon spathula (Mississippi paddlefish): 121315888
Entry
121315888         CDS       T07273                                 
Name
(RefSeq) adenomatous polyposis coli protein-like isoform X1
  KO
K02085  adenomatosis polyposis coli protein
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310  Wnt signaling pathway
pspa04519  Cadherin signaling
pspa04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121315888
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    121315888
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121315888
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121315888
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121315888
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pspa04812]
    121315888
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121315888
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    121315888
Cytoskeleton proteins [BR:pspa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    EB / APC
     121315888
SSDB
Motif
Pfam: Arm_APC_u3 APC_basic EB1_binding APC_r APC_u5 APC_rep APC_u9 APC_u14 SAMP Arm APC_N_CC APC_u15 APC_u13 APC_15aa Suppressor_APC ARM_ARMC5 F36G3_coil Sec7-like_HUS
Other DBs
NCBI-GeneID: 121315888
NCBI-ProteinID: XP_041106389
Position
1:complement(24257246..24314803)
AA seq 2849 aa
MAAASYDQLLKQVEALKMENSNLRQDLEDNSNHLTKLEREASNMKEVLKELQGSIEEESM
GSSGQIDLLERLKEMNLDPSNFPGVKLRPKVSLRSYGSREGSVSGRSGESSPVPMGSHPR
RGLVSSSRESTGYLEELEKERSLLIAELEKEEKEKDWYYAQLQNLTKRIDSFPLTENFSL
QTDMTRRQLEYEARQIRAAMEQQLGTCQDMEKRAQARVARIQQIEKDMLRIRQHLQAQTA
ESEKTSQSKHDPPSRDAERQGEGGHAAVELGMGTTVCGQGSGVRMDHETASDMSCSSSYS
VPRRLTSHLGTKVTEDSKPQVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSG
CLPLLIQLLHGNDKESVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLE
QIRAYCETCWEWQEAHEQGVDQDKNPMPSPVEHQICPAVCVLMKLSFEEEHRHAMNELGG
LQAIGELLQVDCEMYGLTNDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVA
QLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSA
LWNLSAHCTENKADICAVDGALAFLVSTLTYRSQTNTLAIIESGGGILRNVSSLIATNED
HRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNVKDQEALWDLGAVSMLKNLI
HSKHKMIAMGSAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQKALIEELDAQHLSE
TFDNIDNLSPKASHRNKQRHKQNVYSEYVLDSGRHNEDGMCRSESFNATNLTVLSPYMNT
TVLPGSTSSETRGNTESSRTEKDRSTERERRGPGPGGFHPSENSSKRIGMQISTTAAQIA
KVMEEVQSIHISQDDGSTGSSADLHCRQEERSGPRRTSASHTHSNAYHFNKQEHPSRTCP
MPYGKIECRASNDSLNSVSSSDGYGKRGQMKPSVESYSEDDDGYGKRGQVKQSVESYSED
EEGKFCSYGKYPADLAHKIHSANHMEDNDGEMDTPINYSLKYSDEQLNSGRQSPSQNERW
PRPKHLVEDEMKRNEQKTSRTQNQGYSIYTENSSEAADKHMKFPPRFGQALCPGPFRQRG
CNGSEQTGSGSNHGIKQKMNPSHCPVDDYDDDKPTNYSERYSEEEQHDEEDQPTNYGIKY
SDEHHHVEPIDYSIKYSSEVPSSQKYGHSKATSVQNSTKDHITQNSGSSSGPSTKNSVRQ
NQLHPSSAQTRSGPTRVLQKSTTGKAPSINQETIQTYCVEDTPICFSRGSSLSSLSSAED
EMEGREQHRNVANNYPTLPIADKDSNGSLCADTPMAEDQTSSQYTRMKAQRHQSSNVASS
DGSRHKAVEFSSGAKSPFKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESHSIASS
VQSEPCSGMVSGIISPSDLPDSPGQTMPPSRSKTPPPPHAGQMKNKVKVPNNADERELAP
RHVAVNAAIQRVQVLPDNDTMLHFAIESTPDGFSCSSSLSALSLDEPFIQKDVTLQIMPP
VHEDDHGNGEPEKEEDTKEHESQDKPPNSSEPEKDILNDSDDDDIDILEECINSAMPTKS
SRKNKKPPPVARKPSQLPVYKLLPSQNRGQQQKNANFTHGEDMPRVYCVEGTPINFSTAT
SLSDLTIESPPNELANTESSNIETQGTGSSAMERRDTIPMEGRSIDGKDTVKGSAAPCLP
LDDEKAEGDDILYECISSAMPKGKSHKPFRVKKIIDQVQQTSTSPGNPRQQDTEKKKPTS
PVKPMPQSSEYRARVMKPPNSFSSGTYPDKNKDAKKRDPKNSRECSNKPPNSEERVRGSF
AFDSPHHYSPVEGTPYCFSRNDSLSSLDFDDDELDFSKEKAELKKEKEHKKASTRNVNEQ
TSNHPPVSRTQVYQRPGPNRGPAKLLQKQATFPQASKDNIGSVTDEKMQNFSIEDTPVCF
SRNSSLSSLSDIDQENNNKESSLDRQKENSSVQVEGSRPQASGYAPKAFNVEDTPVCFSR
NSSLSSLSIDSEDDLLQECISSAMPKKKKQPAKSHGGDNATNDDKHIGGILTEEPDLTLD
LRDIQSPISEQAHSPDSETFDWKAIQEGANSIVSSLHQAAAASLSRQASSDSDSILSLKS
GISLGSPFHLASDQEEKPVASNKGPRILKPGEKSTSESKKKEEEQAKALKGGKKVYKSLI
TGKARSSVDISSIPKHQAPVPLISRGRTMIHIPGIRNSSPSTSPIPKKTPPKNTPLKAPT
TGQISSNSPRGVKTPAKSDPSSANRQQGAQGGSSKGSSRSGSRDTTPSRPAQQTLSRPVQ
SPGRTSVSPGRNRISPPNKLSQLPRTSSPSTASTKSSGSGRMSYTSPGRHLGQQTPTKQS
CLPRSTSGIPRSESASKGLNQSAAAGSSKKVELSRMSSTKSSGSESDRSERPVLVRQSTF
IKEAPSPTLKRKLEESASFESLSPTSRPVSPNRSQSHTPVLSPSLPDMSLTLPYQGSCWR
KSPQSQNSSENGDDRSLRRHDIARSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWKR
TGSSSSILSASSESSEKGKSEDERQHASFAQGSKQSKEIHTPLKGTWRKIKESENPQNPS
GDGSDADSVVHQMAPAVSKTEDVWVRIEDCPINNPRSGKSPTGNTPPIIDSVPEKLTIDD
PDPKDTQSKQAAVNDIVAVCTTGLEHHVNSFIMNESPEKKAAETKSVASYPAATPETSEN
PVTERTPFSSTNSSKHSSPSGAVAARVTPFNYNPNPRKSSTDNGSARPSQIPTPINSSTK
KRDSKGDSAESSGNQSPRRLSGSYLVTSV
NT seq 8550 nt   +upstreamnt  +downstreamnt
atggctgcagcttcttatgaccagctgctaaagcaagtggaggcacttaaaatggaaaac
tcgaatcttcgacaagatcttgaggacaactcaaatcaccttaccaaacttgaaagagag
gcatcaaacatgaaggaggtgcttaaagagttacaaggaagcattgaagaagagtccatg
gggtcttctgggcaaattgacctgttggagcggctgaaagagatgaacttggatccaagt
aatttccctggggtcaaactaaggccgaaggtttcattacgctcatacggcagtcgagag
ggctcagtatctgggcggtcaggagaaagcagccctgtacccatgggctcccatccacga
aggggattggtcagtagcagccgggaaagcactgggtatctggaggagttagagaaagaa
agatctttattaattgctgaactggagaaggaagagaaggaaaaagattggtattatgca
caacttcagaatctcacaaagaggattgacagctttccgctcactgagaatttttctctg
caaacggacatgacaagaaggcaattggaatatgaagcgaggcagatcagagctgcaatg
gagcagcagcttgggacatgccaggacatggagaaacgggcacaggcaagagtagctaga
attcagcaaatagagaaagacatgcttcgcattcgacagcacttacaggctcagacagca
gaatcagagaagacatcgcagagcaagcatgatccaccttcacgtgatgcagaaagacag
ggtgagggaggacatgcagctgtagaattgggcatgggtaccacagtgtgtggtcagggt
tcaggtgtccgcatggatcatgagacagccagtgatatgagctgtagtagtagttattct
gtccctcgaagactgacaagtcacctgggtaccaaggtaaccgaagattccaagccccag
gtggaaatggtgtattcgctgctgtcaatgcttggtacccacgataaggacgatatgtcc
cgcactttgctagcgatgtctagctcccaggacagttgtatagcaatgcggcagtcaggg
tgccttcctctgctgatccagctgttgcatggaaatgataaagaatctgtgctgctggga
aattcccgtggaagcaaggaggcccgtgcaagggcaagtgcagcgctacacaatatcatc
cactcgcaaccagacgacaaacgtggaaggagagaaatacgtgtgcttcacctgttggaa
cagattcgtgcttattgtgaaacatgctgggaatggcaagaggcacatgaacaaggtgta
gatcaggacaaaaacccaatgccatcaccagtggagcatcagatctgccctgctgtatgt
gtgcttatgaaactgtcttttgaggaagaacacaggcatgctatgaatgaacttggagga
ttgcaggctataggagagttgttgcaggtagactgtgaaatgtatggacttaccaatgac
cactacagtgttactctgaggcgttatgcaggaatggctcttacaaacttaacatttggc
gatgttgcaaataaggcaactttgtgttcgatgaaaggctgtatgagggcaatggtggca
caactgaaatccgaaagtgaagatttacagcaggtaattgcaagtgtcttgaggaatttg
tcttggcgtgctgatgttaatagtaaaaagactctacgtgaagtaggaagtgtgaaagca
ctaatggaatgtgctctggaagtgaagaaggaatctacccttaaaagtgtactcagcgcc
ctctggaacttgtcggcacactgcaccgagaacaaggcagacatctgcgctgtggatggt
gcattggcctttttagttagcactttaacctacagaagtcaaaccaacactttagccatc
atcgaaagtgggggaggcatcttgcgaaatgtgtccagtctcattgctacaaatgaagat
cataggcagatactgcgagaaaataactgcctacagacgctgttacaacacttgaaatct
cacagcctaacaatagttagtaatgcatgtggaactctatggaacctttcagctcgcaat
gtaaaggaccaagaggccttatgggacttgggagctgtgagcatgcttaagaaccttatt
cattcaaagcacaaaatgattgcaatgggcagcgctgctgctttacgaaacctaatggcc
aaccgacctgctaaatataaggatgcaaacattatgtcccctggatctagcttaccttcc
ttgcatgtcagaaaacagaaagctttgatagaagaactggatgcacaacatttatcagaa
acttttgataacatcgacaatttgagccccaaagcatcccatcgaaacaaacaaagacac
aagcaaaatgtgtacagtgaatacgttttggactctggacggcacaatgaagatgggatg
tgtaggtctgagagttttaatgctaccaatttgactgttctctctccttatatgaacact
actgtactgcccggctcaacctctagtgaaactaggggaaatacagaaagttctaggact
gaaaaagacagaagcactgaaagagaaaggcgaggaccaggacctggtgggttccatcct
tcagaaaattcttcaaaaagaattggaatgcagatatctacgacagctgcacagattgcc
aaggtcatggaagaagtgcagagcatacatatatcccaagatgatggaagtacagggtct
tcagcagatctgcattgtcgacaagaggaaaggagtggcccgagacgaacatccgcttct
cacacgcactctaatgcgtatcactttaacaaacaagagcatcccagtaggacatgccct
atgccatatggaaaaattgaatgtagagcatcaaatgacagcctaaacagtgttagcagc
agtgatgggtatggtaaaaggggtcagatgaagccatctgtggaatcctattcagaggat
gatgatggatatggtaaaaggggtcaggtgaagcagtcagtggaatcctattcagaggat
gaggaagggaagttttgcagttatggaaagtatcctgctgacctagcccacaagatacac
agtgccaaccatatggaagataatgatggagagatggacaccccaataaattacagtctt
aaatattcagatgaacagttaaattcaggaaggcaaagccctagccaaaatgaaaggtgg
ccaagacctaaacatcttgtggaagatgagatgaagaggaacgaacaaaaaacatcaagg
actcaaaaccaggggtattcaatttacacagaaaacagtagtgaggccgctgataagcat
atgaaattccccccacgatttggacaggcgctgtgtcctggtcctttcagacaaagaggc
tgtaacggctcagagcaaactggatctggttctaatcatggaattaaacaaaagatgaat
ccatcacactgcccggtagatgactatgatgatgataagccaaccaattatagcgagcgg
tattcagaagaagagcaacatgatgaagaggatcagccaacaaattatggaataaagtat
agtgacgaacaccaccatgttgaacccattgactacagtataaagtactcctctgaagtc
ccgtcatctcaaaagtatggacattcaaaggctacttctgttcagaactcaacgaaggat
catataacacaaaacagtggaagcagctctggtccatcaaccaaaaattctgtccgacaa
aaccaacttcacccatcctcagcccagacaagatcaggtccaactcgggtactccaaaag
tctaccacaggcaaggcaccttccatcaatcaagaaactatacagacgtactgtgttgaa
gacacaccaatctgtttttccaggggcagttccctgtcgtctttgtcgtctgcagaggat
gagatggaagggcgtgagcagcacaggaatgttgcaaataactacccaactttgcctatt
gctgacaaagattctaatggttctttatgtgctgacacgcccatggctgaagaccagacc
tcttctcagtatacaagaatgaaagcccaaagacatcagtcctctaatgtggcaagttct
gatggatcaagacataaagctgttgagttctcgtccggtgccaaatctccattcaaaagt
ggggcacagactccaaaaagccctccagaacattacgtacaagaaactcctctaatgttt
agcaggtgtacttctgtaagttctttggacagctttgagagtcactcgattgccagctct
gtacagagtgaaccttgcagtggaatggtcagtggaattatcagtccaagtgatctgcca
gatagtccgggtcagacaatgcccccaagcagaagcaagacccctcctccaccacatgca
ggtcaaatgaaaaacaaagtgaaagtgcctaataatgctgatgagagagagttggctcca
aggcatgttgctgtaaatgctgctattcagagagtccaggttcttccagataatgatact
atgttacattttgcaatagaaagcactccagatggcttctcttgttcatcaagcttaagt
gctctgagtcttgatgagccctttattcagaaagatgtaacactgcaaataatgcctcct
gtacatgaagatgatcatggaaatggagaacctgaaaaggaggaagacacaaaagaacat
gagagtcaggataaaccacctaattccagtgaacctgaaaaagatatacttaatgattct
gacgatgatgacattgatatattggaagaatgtataaattcagccatgccaaccaagtct
tcaagaaaaaacaaaaagccgcctcctgtcgccagaaaaccaagccagcttcctgtatat
aaactcctcccttctcaaaaccgaggacagcagcaaaaaaatgctaatttcacacatgga
gaagacatgcctagagtatactgtgttgagggaactccaattaacttttctacagccaca
tctctaagcgacctaaccatagagtcacctccaaatgagcttgctaacactgaaagttct
aatattgaaacccagggtactgggtcatctgccatggaaagacgagacactattccaatg
gagggaagaagcatagatggcaaagatacagtaaaaggctccgctgctccctgtttacct
ctggatgatgaaaaagcagaaggcgatgacatactatatgagtgtattagttcagcaatg
ccaaagggtaaaagtcataagcctttcagggtaaagaaaattatagatcaggtacagcag
acatctacatctccaggtaacccaaggcaacaagatactgagaaaaagaaacctacttct
ccagtaaaaccaatgccgcaaagcagtgaataccgagctcgagtgatgaagcctcctaac
agtttttcctcaggcacttaccctgataaaaataaggatgccaaaaaacgagatcccaaa
aattccagggaatgtagtaataagcctccaaatagcgaagaacgtgtacgtggaagtttt
gcttttgattccccgcatcactatagtccagtagagggcaccccttattgtttctcacgc
aatgattccctgagttcattagactttgatgatgatgaactagatttttctaaagagaaa
gctgaacttaaaaaagaaaaagaacataaaaaagcatccacaagaaatgttaatgagcaa
acgtccaaccacccacctgtaagtagaacgcaagtgtaccagaggccaggtcctaataga
ggccctgcaaaactgttgcaaaaacaagcaacatttccacaggcatccaaagataacata
ggctctgttacagatgaaaaaatgcagaacttttctattgaagacaccccagtgtgtttt
tcaagaaattcatctctcagttcattaagtgatattgaccaagaaaacaataacaaagaa
agtagtcttgatcgtcagaaagaaaattcaagtgtccaggtggaaggatcgaggccccag
gcttcaggttatgctccaaaggcatttaacgttgaagacactcctgtgtgcttttccaga
aacagttctcttagctctcttagcattgactcagaagatgatcttctacaagaatgtatt
agttctgctatgcccaagaagaaaaaacagcctgccaaaagccatggaggtgacaatgca
acaaatgatgacaaacatattggggggattttaacagaagagccagatttaacattggat
ctaagagatatacaaagtcctatttcagagcaggcacactctcctgattctgaaactttt
gactggaaggctattcaagaaggtgctaattctattgtaagtagcttacatcaggctgct
gctgctagcctttccagacaggcctcttcggactctgattcaatactgtctcttaaatcg
ggcatctctctaggatctcccttccaccttgcatctgatcaagaagagaagcctgttgcc
tcaaataaaggtccaaggatcttaaagcctggagagaagagcacctcggaatccaaaaag
aaagaagaggaacaagcaaaagctttaaaaggaggaaagaaggtttataaaagtctgata
accggtaaagcacgatccagtgttgacatttcttctataccaaaacatcaggctcctgtt
cccttgatctctcgtggaaggactatgatccatattcctggtataagaaacagctccccc
agcaccagcccaattcccaagaagactccaccaaaaaacacccctctaaaagctccaacc
acagggcagatttccagtaactcgccaagaggtgttaaaactcctgcaaaatctgacccc
agctctgcaaacagacaacagggggctcaaggaggatcaagcaaaggctcatccaggtcg
ggatcaagagatacaactccctctagacctgcacagcagactttatcaagacctgtgcag
tcacctggtcgtacttctgtatcacctggaagaaatagaatcagtcctcccaacaagtta
tcacaattgcctcgcacatcatctccaagtacagcatcaactaagtcatcaggctcagga
agaatgtcttatacatcccccggaaggcatttaggccagcaaactccaaccaagcaaagt
tgtttaccaagaagtactagtgggattccgagaagtgagtctgcttcaaaaggcttgaac
cagagtgcagctgcaggttcttctaaaaaagtagaattgtcaaggatgtcttcaacaaaa
tcaagtggaagtgagtctgatagatcagaaagaccggtactggtccgtcagtcaaccttt
atcaaagaagctcctagtccaacactgaagagaaaactagaagagtctgcctcatttgaa
tcattgtcacctacatcaagaccagtctcccccaacagatcccagtcccacacaccagtt
ttaagtccatcacttccagatatgtcattaaccttgccatatcaaggtagttgttggagg
aaatccccccaaagccaaaactcttctgaaaatggggatgataggtctctgagaaggcat
gacattgcccgttcacattctgagagcccatccagactcccaattaacaggtccggcact
tggaagcgtgagcatagcaagcactcttcatctctcccaagagttagcacttggaaaaga
actgggagctcctcctccatcctttctgcatcttctgagtcaagtgaaaagggaaaaagt
gaagatgaaaggcaacatgcaagttttgctcaaggaagcaagcagagcaaagaaatccat
acccctttgaaaggaacatggaggaagatcaaagaaagtgaaaatccccaaaatccgtct
ggtgatggaagtgatgctgattcagtggttcatcaaatggctcctgctgtgtccaagaca
gaggatgtgtgggtgagaattgaggactgtcctatcaataaccccaggtctgggaaatcg
ccaactggaaatactcccccaataattgacagtgtgccagaaaaattgactattgatgat
ccagaccctaaagacacacagtccaaacaagctgcagtaaatgacattgtggctgtttgc
acaacgggactagagcatcatgtgaattcatttattatgaatgaaagccctgaaaaaaag
gcagcagagaccaagtcagtagcaagttatcctgctgctacaccagagacttctgaaaac
cctgttaccgagcgcactccttttagttctacaaactcaagtaagcacagctcacccagt
ggtgctgttgctgcaagagtaacaccttttaattataatcccaaccccaggaagagcagc
actgataacggctctgcgcggccatcacagattccaacacccataaacagcagcacaaag
aaacgagactccaaaggtgatagtgctgagtctagtggaaatcagagccccagacgcctt
tctgggtcataccttgtgacgtctgtgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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