KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102460895
Entry
102460895         CDS       T02980                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X2
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04010  MAPK signaling pathway
pss04020  Calcium signaling pathway
pss04510  Focal adhesion
pss04518  Integrin signaling
pss04519  Cadherin signaling
pss04540  Gap junction
pss04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pss00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102460895 (PDGFRB)
   04020 Calcium signaling pathway
    102460895 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    102460895 (PDGFRB)
   04519 Cadherin signaling
    102460895 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102460895 (PDGFRB)
   04540 Gap junction
    102460895 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102460895 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pss01001]
    102460895 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pss04090]
    102460895 (PDGFRB)
Enzymes [BR:pss01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     102460895 (PDGFRB)
Protein kinases [BR:pss01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   102460895 (PDGFRB)
CD molecules [BR:pss04090]
 Proteins
  102460895 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 ig VEGFR1-3_N_Ig-like I-set Ig_2 V-set C1-set Ig_VEGFR-1-like_5th VEGFR-1-like_Ig-like Peptidase_M50
Other DBs
NCBI-GeneID: 102460895
NCBI-ProteinID: XP_075756656
Ensembl: ENSPSIG00000013306
Position
17:complement(34947283..35022621)
AA seq 1122 aa
MGRVNIHLSPARADRQRRGHCCQGGRGLQCSGTPAMLPPSLKMLLLVLAGLPATASTGTT
LRISPSDPEVVLPLSSNFSLTCSGEAEVIWERDMQPIAASPEQRDGTFTSTLTLWDVTGL
DTGEYACSYNHSQKPMERKAVYVFVPDPSLVFLPPGPEDSFIFIIGSSEATIPCRVTDPQ
ATVTLYEKKVKIPIPADYDRQQGFKGFFEDKTYICSVTLGEREVHSDPYYVYRIQVSSLN
VSIGAVQTMVKRGENITVMCTVSDNEVVDFSWSYPRKEAGKAVEPVTDFLPGSSYEIRSI
VTIQDAELEDAGTYSCHVSEVSHQNKDRKDIEIRVIERGFVRFHTGLTDVELAEVHKSHT
IQVQLEAYPPPTILWLKDNETLRVGNSSEFAITSKSLSETRYQTTLTLVRVKQKEGGFYT
VRVSHEDDTQELSFYLQINVPAKVLLLKENSNTSSGEQTVTCATEGMPEPELSWFTCSDI
KGCGSQEQPTRLLGNSSEEINLQTGTVYHEALKVYQVNSSLRLRSMDERRLIRCSVQNLL
GSDYQDITLAPHAFPFKVVLISGILALVVLAVVFLAILVIVWKKVRKPRYEIRWKVIESV
SSDGHEYIYVDPMQLPYDCSWELSRDKLVLGRTLGSGAFGRVVEATAHGLSHSQSVMRVA
VKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDY
LLRNKHTFLQYYTEKARREMEVYGNVSEEEKVYSLAFAVESDGGYMDMSKDESLDYVPMS
DMKGELKYADIDPSNYGTPYELDSYSPSAPDQTDRVTLINESPLLSYTDLVGFSFQVANG
MEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE
SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMSKPTHASNEI
YDIMQKCWEEKFEIRPSFSQLVVLMGNLLADTYKKRYQQVEEEFLKSDHPAVLRTRPRIP
GVSSAEFPPSPGSVLYSAVQQDGGDNDYIIPLPDPKPDGIDDGPQEASISRASSMLNEAN
TASTISCDSPLDPQQEEEQAPEPKSGCQEPNPEHHTMEESFL
NT seq 3369 nt   +upstreamnt  +downstreamnt
atgggaagagtcaatatccacctctcaccagccagagcagatagacaaaggagaggccac
tgctgccagggaggacgtggcctgcagtgcagtggaacccccgccatgctgcctccatcc
ctgaagatgctcctcctcgtcctcgcaggtttgcccgccacggcctccacaggcaccacg
ctgcgcatttcgcccagcgaccccgaagtcgtcctccctctctcaagcaacttttcactg
acgtgctcgggggaggccgaggtgatctgggaacgagacatgcagcccatcgccgcctcg
cccgagcagcgggacggcaccttcaccagcacgctcacgctctgggacgtgacgggcctt
gacacgggggagtacgcctgcagctacaaccactcccagaagcccatggagaggaaggcc
gtctatgtctttgtgccagacccctccttggtcttcctcccccccggccccgaggactcc
ttcatcttcatcatcggctccagcgaggccaccatcccgtgccgcgtgaccgaccctcag
gccacggtgactctctatgagaagaaggtcaagatcccgattcccgcagactatgacagg
cagcaaggtttcaaggggttcttcgaggacaagacctacatctgcagcgtgacgctgggc
gagcgggaggtgcactccgacccgtattatgtctacagaatccaggtctcctccctgaac
gtttccatcggggcagtgcagaccatggtgaagcgaggcgagaacatcacagtgatgtgc
accgtgagcgacaacgaagtggtcgacttcagctggtcttaccctcgcaaggaggcgggt
aaggctgtggagccggtgacagacttcttgcccggatccagctatgaaatccgctccatc
gtcaccatccaggacgcagagctggaggacgctggcacctacagctgccacgtctccgag
gtctcccaccagaataaggacaggaaggacattgagatccgcgtgatcgagcgcggcttt
gtgaggttccacaccggcctgaccgacgtcgagctggccgaggtgcacaagagccacacc
atccaggtgcagctcgaggcctatccgccgccaaccatcctgtggctgaaggacaacgag
accctgagggtggggaacagcagcgagttcgccatcaccagcaagagcctgtcagaaacc
aggtaccaaaccactctgaccctggtgcgggtgaagcagaaggaaggggggttctacacc
gtccgggtgtcccacgaagacgacacgcaggagctgtccttctacctgcaaattaacgtg
cccgccaaggtgctgctgctgaaggagaacagcaacaccagcagcggggagcagacagtc
acgtgcgccacagaagggatgcccgagccggagctgagctggttcacctgcagcgacatc
aaagggtgcggcagccaggagcagcctaccaggctgctggggaacagctcggaggagatc
aacctgcagaccggcaccgtgtaccacgaggcgctgaaggtttaccaggtgaacagcagt
ctgcggctccgcagcatggacgagcgccggctcatccgatgctctgtgcagaacctcctg
ggtagtgattatcaggacatcaccctagccccacacgcctttccctttaaggtggtcctc
atctccggcatcctggccttggtggtgctggccgtcgtcttcctggcgatcctcgtcatc
gtgtggaagaaggtcaggaagcctcgctatgaaatccgctggaaggtgattgagtcggtc
agctccgatggacacgagtacatctacgtggatcccatgcagctcccctacgactgcagc
tgggagctctccagggacaagctggtgctaggtcgcactctcggatccggagcctttggc
cgagtggtggaggcaacggcccatggcctgagccactcgcaatccgtgatgagagtggcc
gtgaaaatgctcaagtctaccgccaggagcagtgagaagcaggccctgatgtctgagctg
aagatcatgagccacttgggacctcacctaaacattgtcaacttgctgggagcctgcacc
aaaggaggccccatctatatcataacggagtattgtcgctatggagacctagtggactac
ctgctccggaacaagcacaccttcctgcagtactacaccgagaaggcgaggcgagagatg
gaggtgtacgggaacgtttccgaagaggagaaggtgtacagcctcgcctttgctgtggaa
agcgacggcggctacatggatatgagcaaggacgaatccctggactatgttcccatgtct
gatatgaagggagagctcaagtatgctgacatagacccctccaattacggcaccccctac
gagctggacagctattccccctcagctcctgaccagacggaccgtgtgaccctgataaac
gagtccccgctcctcagctacacagacctggttgggtttagtttccaggtggccaatggg
atggaattcctcgcgtccaaaaactgcgtgcaccgagacctggccgcgaggaacgtcctc
atctgcgaggggaagctggtgaagatctgtgacttcgggctggccagagacatcatgagg
gattccaactacatctccaaaggcagcaccttcctgcctctgaagtggatggcacccgag
agcatcttcaacaacctctacacgaccctgagtgatgtgtggtcctttgggatcctcctc
tgggagatattcactctgggtgggactccataccccgaactacccatgaacgaacagttc
tacaacgccatcaaacgtggctaccgcatgtctaagcccacccatgcttccaacgagatc
tacgacatcatgcagaaatgttgggaagagaagtttgagataagaccgtccttctctcag
ctggtggtactgatggggaacctcctggcagatacatacaagaagcggtaccagcaggtc
gaggaagaattcctgaagagcgaccacccagctgttctacgcaccaggcccaggatccca
ggggtcagcagtgccgagttcccccccagccccggaagtgtcctctattccgctgtgcag
caggatgggggggacaacgattacatcatcccccttcctgatcccaagccagatggaatc
gacgacggccctcaggaagcttccatcagccgggccagttctatgctaaacgaagcaaac
acggcgtccaccatatcctgcgacagccccctggacccgcagcaggaagaggaacaagca
ccagaaccgaagtcaggctgccaggagccaaacccagagcaccacactatggaagagagt
tttctgtag

  All links  
Gene (20)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system