KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130198602
Entry
130198602         CDS       T09868                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145  Phagocytosis
pswi04517  IgSF CAM signaling
pswi04540  Gap junction
pswi04814  Motor proteins
pswi05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    130198602
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    130198602
  09144 Cellular community - eukaryotes
   04540 Gap junction
    130198602
  09142 Cell motility
   04814 Motor proteins
    130198602
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130198602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130198602
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pswi04812]
    130198602
   04147 Exosome [BR:pswi04147]
    130198602
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     130198602
Cytoskeleton proteins [BR:pswi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    130198602
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130198602
  Exosomal proteins of colorectal cancer cells
   130198602
  Exosomal proteins of bladder cancer cells
   130198602
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 130198602
NCBI-ProteinID: XP_056277802
Position
8:complement(17140358..17145294)
AA seq 449 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPSGSYQGDSDLQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVMDVV
RKESENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNTTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVDEMGEYEEDEIEKEEDLRH
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggaaatagttcatctccaggctggacagtgtgggaatcagattggggcgaagttc
tgggaggtgataagtgacgagcatggcatcgacccctcgggtagttaccaaggtgacagc
gacctgcagctggagaggataaacgtctactacaatgaggcatcagggggcaagtacgtc
cctcgtgccgttctggtcgacctggagccaggaaccatggactcggtgcgctccggccca
ttcggacaactgttcaggcctgacaactttgtctttggtcaaagtggagcaggaaataac
tgggctaagggtcactacaccgagggagcggagctggtggactcggtgatggacgtggtg
aggaaagagtctgagaactgcgactgcctccagggcttccagctcacccactcactgggt
ggaggcacaggttcaggcatgggtacgctgctcatcagcaagatccgggaggagtacccg
gaccgcatcatgaacaccttcagtgtcatgccttccccaaaggtgtcggacaccgtggtg
gagccgtacaacgccactctctccgtccaccagctggtggagaacacggacgagaccttc
tgcattgacaatgaggccctctacgatatttgcttccgcaccctgaagctgaccacgccg
acctacggagacctcaaccacctggtgtccgccaccatgagcggggtgaccacctgtctg
cgcttccccggccaactcaacgccgacctccgtaagctggccgtcaacatggtgcccttc
ccccgcttgcatttcttcatgccgggcttcgcgcccctcacgagccggggcagtcagcag
taccgggccctcaccgtgccggagctcacgcagcaaatgttcgacgccaagaacatgatg
gccgcctgtgacccgcggcacggacgctacctcaccgtggcggccatcttccgcggccgc
atgtcaatgaaggaggtggacgagcagatgctgaatgtacagaacaagaacagcagctac
tttgtcgaatggattcccaacaatgtcaagacggccgtttgcgacatccctccccgtggc
ctgaaaatgtccgccaccttcatcggcaacaccacggccatccaggagctgttcaggagg
atctccgagcagttcacagccatgttccgccgaaaggccttcctccactggtacacgggc
gagggaatggacgagatggagttcactgaggccgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggatgccactgtggatgagatgggtgaatatgaagaagacgag
atcgagaaagaggaagatcttcgccactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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