KEGG   Psychrosphaera ytuae: J1N51_13760
Entry
J1N51_13760       CDS       T07123                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psym  Psychrosphaera ytuae
Pathway
psym02020  Two-component system
psym02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psym00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    J1N51_13760
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    J1N51_13760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psym03000]
    J1N51_13760
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:psym02035]
    J1N51_13760
Transcription factors [BR:psym03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    J1N51_13760
Bacterial motility proteins [BR:psym02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    J1N51_13760
SSDB
Motif
Pfam: Sigma54_activat FleQ Sigma54_activ_2 HTH_8 AAA_5 HTH_50 AAA_7 AAA_16 AAA TIP49 AAA_2 MCM nSTAND3
Other DBs
NCBI-ProteinID: QTH63762
UniProt: A0A975HI30
Position
3131363..3132847
AA seq 494 aa
MGNEVKVGLGKILILDENATRAELVSHLLGFIGEPCQIVTKSEFAEACQPEENIMACILG
ALKSGDHEELVASQPAVPFLVLGDTLKYLFDKKNVIGMLSEPLSYPVVIQQIRDCQEYKR
LLPKRSALTDGSKFDGLIGTTNAMQTIRFLIKQVAEKDANVLILGDSGTGKEVIARNVHL
LSTRNKGPFVPVNCGAIPGELLESELFGHEKGAFTGAISSRKGRFELAQGGTLFLDEIGD
MPLQMQVKLLRVIQERTYERVGGNKPIKADVRIVAATHRNLESMIDEGKFREDLFYRLNV
FPIESPSLKDRADDLEQLIQEFINRFEKQHQARFSLTERALDSLKQHKWPGNVRELGNLV
ERLLIMFPNQTVDVHDLPQRYCYTDEAPFVPEYPDEILERQALNDIFAFNDEEESDEPDD
DFVMSATTFADPTTVMLPPEGLDLKEYLSELEINLIEQALQNCDYVVSRAAEQLSLRRTT
LVEKMKKYDLNKDE
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgggaaatgaagtaaaagttggtttgggaaaaatcctgatcctagatgaaaacgccacg
cgtgctgagttggtgagccacctactcggttttatcggcgagccttgtcaaattgtgacc
aagtcagagtttgctgaagcctgtcagccagaagaaaacatcatggcttgtattttaggt
gcattaaagtctggcgatcatgaggagcttgttgcttcacaaccagccgtcccttttttg
gtattgggtgatactcttaagtatttattcgataagaaaaacgtaatcggtatgctcagt
gagcctttgagttatcctgtagtaatccaacaaattcgcgattgccaagagtacaaaagg
cttcttcctaaacgctccgcattaaccgatggttctaaattcgatggtttgattggtacc
accaacgcgatgcagacgattcgctttttgattaaacaagttgctgaaaaagacgcaaat
gtattgatcttaggtgacagtggtacaggtaaagaagttatcgctcgcaacgtccacttg
ctgtctacacgtaataaaggtccatttgttccagttaactgcggagcaatacctggtgag
ctactagaaagtgagctgtttggtcatgaaaaaggcgcatttaccggagcaatttcatct
cgtaaaggtcgttttgaattagcccaaggcggtacgctatttttagatgaaatcggcgat
atgccattacaaatgcaagtaaagcttttgcgggttattcaagagcgcacttacgaacga
gtcggtggtaacaaacctatcaaagcggatgttcggatagtcgcggcgactcaccgtaac
ttagagtcgatgattgacgaaggtaaattccgtgaagatttattttatcgattaaacgta
tttcccattgagtcaccgtctttaaaagaccgtgcggacgacttagagcaactaattcaa
gagtttatcaatcgttttgagaaacagcatcaagctcgatttagcttaacagaaagagcg
ctcgattcgttaaagcagcacaagtggcctggtaacgtgcgtgagttaggtaacttagtc
gagcgcttgcttattatgtttcctaatcaaaccgttgacgtacatgatttgccgcaacgt
tattgttacacagatgaagcgccgtttgttcctgagtatccggacgaaatattagagcgc
caagcgttgaatgacatatttgcatttaatgatgaagaagaatctgatgagccggatgat
gactttgttatgtctgcaactacgtttgcggatccaacaacggttatgctgccaccagaa
gggctggatttaaaagagtacctgtcagagttagaaatcaaccttattgaacaagcacta
caaaattgtgattacgttgtgtcgagagccgccgagcagctctctttaaggcgaacaaca
ctcgtcgaaaaaatgaaaaagtacgacttaaataaagatgaatag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (15)   

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