KEGG   Pseudomonas sp. Y39-6: HXW90_01035
Entry
HXW90_01035       CDS       T11426                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psyq  Pseudomonas sp. Y39-6
Pathway
psyq02020  Two-component system
psyq02024  Quorum sensing
psyq02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:psyq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HXW90_01035
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HXW90_01035
   02025 Biofilm formation - Pseudomonas aeruginosa
    HXW90_01035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psyq03000]
    HXW90_01035
Transcription factors [BR:psyq03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    HXW90_01035
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 HTH_24 MarR Crp HTH_IclR NirdL-like_HTH
Other DBs
NCBI-ProteinID: QPO18173
Position
236784..237470
AA seq 228 aa
MNAEQWRPRLAAGHWFSHLPGAFQHSLLAHARLRLLTAGQYLFKRGDQPCGLYAVLDGSL
RISAVNEQGKEALLSLVESPYWFGEICLFDGLPRTHDACAVGPCKLLQVPQQALLDILDE
TPQYWRDLALLMSQKLRLSFIGLEQLSLMPASVRLAHRLLMIIEGYGDIEPSKRRLQLPQ
EDLAAMLSLSRQTTNALLKDLQAQGIVRLGYGEIEILDAQRLREAAHT
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaacgcagagcaatggcgaccccggctggctgccgggcactggttcagccacttgccc
ggcgcttttcagcatagtctgctggcccacgcgcggctgcggctgctgacggcggggcaa
tacctgttcaagcgcggtgaccagccctgcggcttgtatgcggtgctcgacggcagtttg
cggatcagcgcggtgaacgagcagggcaaggaagcgctgctcagcctggtggagtcgccc
tactggttcggtgaaatctgcctgttcgacggcctgccgcgcacccatgacgcctgtgcg
gtcgggccgtgcaagctgttgcaggtgccccagcaggcattgctcgacattctcgatgaa
accccgcagtactggcgcgacttggccttgctgatgagccaaaagttgcgcctgagtttc
atcggcctcgaacagctcagcctgatgcccgcctcggtgcggctggcccatcgtttgttg
atgatcattgaagggtacggcgacatcgaaccctcaaaacgccggctgcagttaccccag
gaagacctggcggcgatgttgagcctgtcgcgtcagaccaccaacgccttgctcaaggac
ctgcaagcccagggcatcgtgcgcctgggctatggcgagatcgaaatcctcgatgcacag
cgcctgcgtgaggcggcgcacacctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (9)   

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