KEGG   Primulina tabacum: 142547435
Entry
142547435         CDS       T11246                                 
Name
(RefSeq) transcription elongation factor SPT4 homolog 1-like
  KO
K15171  transcription elongation factor SPT4
Organism
ptab  Primulina tabacum
Pathway
ptab03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    142547435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptab03021]
    142547435
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142547435
Transcription machinery [BR:ptab03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     142547435
  RNA polymerase I system
     142547435
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     142547435
SSDB
Motif
Pfam: Spt4 PylS_N
Other DBs
NCBI-GeneID: 142547435
NCBI-ProteinID: XP_075511846
Position
5:complement(33466087..33469390)
AA seq 120 aa
MTNHEGVVAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFQMEDDHERVVDCTT
PNFTGIISVMDPGRSWAARWLRIGKFVPGCYTLAVSEALPHDLQNICEDEHVPYVPPKRA
NT seq 363 nt   +upstreamnt  +downstreamnt
atgactaatcatgagggagtagtggctgcacagatacccacaagctttggacatgagctt
cgagcttgtcttcgctgccgtcttgtcaagacgtatgatcagtttcgggaatcagggtgc
gagaactgccctttctttcaaatggaggatgaccatgaacgcgttgttgactgcaccact
cccaatttcaccgggataatctcagtcatggaccctggtaggagttgggctgctcggtgg
ctccgaatcggaaaatttgttcctggttgttacacacttgcagtttctgaagcactccct
cacgacctgcagaatatttgtgaagacgagcatgtgccatatgttccaccaaaacgagca
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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