KEGG   Pseudoalteromonas tetraodonis: PTET_a2551
Entry
PTET_a2551        CDS       T05282                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ptd  Pseudoalteromonas tetraodonis
Pathway
ptd02020  Two-component system
ptd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ptd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PTET_a2551 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PTET_a2551 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptd03021]
    PTET_a2551 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ptd02035]
    PTET_a2551 (fliA)
Transcription machinery [BR:ptd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PTET_a2551 (fliA)
Bacterial motility proteins [BR:ptd02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    PTET_a2551 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 GerE
Other DBs
NCBI-ProteinID: ATD03867
Position
I:complement(2463895..2464575)
AA seq 226 aa
MIVEKHASLVKKVACHLIARLPASVQLDDLIQSGMIGLIEASKNFDASKGASFETFAGIR
IRGAMIDEMRRGDWVPRSVHRKSRLVAETIVALENSLNREPKDSEVAEKLEISLNEYHHI
LNDVNVSKVLGIEDLGIDDDVITPHGQDLALDKPFNNVKNERFNESLLSAIKSLPEKDAM
VLSLYYNDEMNLKEIGHILDVSESRVSQIHGQAMIKLKAKINDWIN
NT seq 681 nt   +upstreamnt  +downstreamnt
atgattgttgaaaagcatgcctcattagtcaaaaaagtggcgtgccatttaattgctcgt
ttaccggccagtgtgcagctagatgatttaattcaatcgggtatgattggtttaattgaa
gcttcaaaaaactttgatgcaagcaaaggcgcaagctttgaaacctttgccggtattcgt
attcgtggtgcgatgatagacgaaatgcgccgaggcgattgggttccacgttcagttcac
agaaaaagccgtttggttgcagaaactattgttgcgcttgagaacagtttaaaccgtgaa
cctaaagatagtgaagttgctgaaaaacttgaaatttcgctaaatgagtaccatcatatt
ttaaacgatgtaaatgtaagcaaagtgttaggtattgaagaccttggtatagatgacgat
gtgattacacctcatggccaagatttagcactagacaaaccgttcaataatgttaaaaat
gaacggtttaatgagtctttactcagtgcaataaagtcgttaccggaaaaagatgcaatg
gtgctttctttgtactataacgatgagatgaatttaaaagaaattgggcatatactcgat
gtaagtgaatcgcgtgtaagtcagatacatggtcaggcgatgattaagcttaaagcaaaa
atcaatgactggataaactag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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