KEGG   Paramecium tetraurelia: GSPATT00031113001
Entry
GSPATT00031113001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00031113001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00031113001
Spliceosome [BR:ptm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GSPATT00031113001
 Complex B
    GSPATT00031113001
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus RRM_1 NanE
Other DBs
NCBI-GeneID: 5014066
NCBI-ProteinID: XP_001428282
Genoscope: GSPATT00031113001
UniProt: A0BQR7
Position
undetermined
AA seq 312 aa
MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPMEVA
IASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYTSE
LFAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTK
FKKSLFNQMYEEHPEYREKKEKEVVEQDNLIVILFRKSPKKHKKKEKKSNKKKSSSSRES
SRRNSIERQKMINDWNETGIQNVSQAQKMMYGNNMPAPVYTPKVSMRTSPELLQLQLQLA
ALKEQLAAIKMS
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcaggcgggttagaaagagtgtatggaacagaggaagacaaagtgaattgttcattt
tatataaaaattggagcttgtcgttatgaaaacaaatgttaaagaattcatagcatacct
ccaatctcttagactattttattcaaacatatgtattaaaactctccaatggaagtagca
atagcttctggaaatgcagtgtcttaagcgggtattgaagaggcattggagaaattcgaa
aacttttatgaagacgtatttttgaaactggcagagtttggtgagattgaagatttgatt
gtatgcgaaaacattggagatcatttagtgggaaatgtatatgtgaaatacacatcggaa
ttgtttgcagagtcatgtttcaatactctttagaatttatcatatgaaaatagacctttg
caaatggagtattcacctgttttggactttagtagtgctaaatgcaaataatacattgat
gggacatgttagagaggaggagcatgcaattacttacatcttaagaagatatcgacaaaa
ttcaagaagagtttatttaatcaaatgtatgaggaacacccagaatatagagagaaaaaa
gagaaggaagtcgttgagtaagacaatttaattgttattctgtttagaaagagtccgaag
aaacacaaaaagaaggagaagaaaagcaataagaagaagagtagtagtagtagggaatca
agtcgcaggaattctattgaaagacagaaaatgattaatgattggaatgaaactggtatc
caaaatgtttcataagcacaaaaaatgatgtatggtaataatatgcctgctccagtttat
actcctaaagtatcgatgagaacgagtccagaattattgcaattgcaattgtaattggct
gctttgaaggaatagttagctgcaattaagatgagttga

  All links  
Gene (8)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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