KEGG   Paramecium tetraurelia: GSPATT00035341001
Entry
GSPATT00035341001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03022  Basal transcription factors
ptm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSPATT00035341001
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSPATT00035341001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00035341001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00035341001
   03400 DNA repair and recombination proteins [BR:ptm03400]
    GSPATT00035341001
Enzymes [BR:ptm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     GSPATT00035341001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GSPATT00035341001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSPATT00035341001
DNA repair and recombination proteins [BR:ptm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GSPATT00035341001
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 ResIII HBB DEAD PhoH AAA_22 AAA_11 SNF2-rel_dom Nbl1_Borealin_N nSTAND3 ArsA_ATPase PHP DHR-2_Lobe_C
Other DBs
NCBI-GeneID: 5019394
NCBI-ProteinID: XP_001433609
Genoscope: GSPATT00035341001
UniProt: A0C5Z5
Position
undetermined
AA seq 702 aa
MKFIIDDIEVIFPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLAFILAYL
AQRPNTIKKLIYCTRTVVEMEKTLEEVRLVMKARKAEGLNDNFTAVGLSSRRNLCINPDV
VNQKDRVDSECRKRTAEWVKRGQSEICIFYDNFEKSAKDFIANLPNDVYSLSDLRKNGGF
SMQCPYYTAREMVKKANIVVYNYLYLIDPGISSLLSKDYIKESVVVFDEAHNIDDVCIEA
YTVRLNKPILAEAINNLKVVETQIQSETNEIQNRLNEEYKKLIKNLEKKPEGELNQLVIP
GQIRKARNFIDFMKRIIQKHQKHLMLFYIIPKALLKRYKRKGNLDIDSLKQCGERLNLLL
NTLQIAETDKFRPLSTVAQFVIRIQRTLNEKLMTLACFDSSLAMKNIFASFQSVILTSGT
MSPIDIYPKILDFKPVVAKSIDIELTRNSIQPIIVTMSEDGTELTSEFTFRNNEDVSRNY
GNFLLELSENVPDGLIVFMPSYSRMEEWARQWQKDKYLEQISKNKVLLIESKDVNETSQK
LQQYRKCCDVGRGAALFSIARGKIAEGIDFEGHYGRCVAVIGFPALNSKDTLILERCKFL
EEKFKITKNDFIEFDAMRQTCQCLGRVLRGKQDYGIMIMADKRFAQKSKLSKMPRWIYKQ
LDQSRCLNITSETAITVVRDFFRQMAQPFKIADNSYFTQDTL
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgaaattcatcatagatgacatagaagttattttcccttacaagtttctgtataaggaa
taattagagtacatgtaggcactgaaataaaccctggatgaaaaaggacatggaattttg
gaaatgcctacaggaacagggaagacagtctcattgctggcattcattcttgcctattta
gcacaaagaccgaacactattaaaaagctgatttattgtacacgtacagtggtggagatg
gaaaaaacattagaggaggtcaggttagttatgaaggcaagaaaggcggaaggtctcaat
gataattttactgctgtcggattgagttcaagaagaaatctgtgtatcaatccagatgtt
gtcaattagaaagatagagtggattctgaatgcagaaagcgaacagctgaatgggttaag
aggggataaagtgaaatatgtatattttatgacaattttgagaagtctgccaaggatttc
atagccaatctacctaatgatgtttatagtttaagtgatttgcgtaagaatggagggttt
tcaatgtaatgtccttactatacggcgagagaaatggtcaagaaggccaatatcgttgtg
tataactatctgtatttgattgatccaggaatatcttcattattgtctaaggattacatc
aaggagagtgtggtagtctttgatgaagcccataacatagatgatgtgtgtattgaagcc
tatacagtgagattgaataaaccaatattggctgaagcaatcaataatctcaaagttgtg
gagacacaaatttagagtgagactaatgagatttaaaataggttgaatgaggaatataag
aaattgattaagaatttagagaaaaaacctgagggagaattgaatcaattggttattcct
gggtaaattaggaaagcaaggaacttcattgattttatgaaaagaataattcagaagcac
taaaaacatctcatgctattttacatcataccaaaagctttactgaagagatataaaagg
aagggaaatctagacattgattctctcaaataatgtggagaacgattaaatctactacta
aacactttgcaaattgcagaaactgataaatttagaccacttagtactgttgcacaattt
gttataaggattcaaagaaccttaaatgaaaaattaatgaccctggcatgttttgatagt
tcattagccatgaaaaacatcttcgcttcatttcaatctgtcatcctcacttcaggtacc
atgtcacctattgatatttatccaaaaatcttagactttaaaccagtcgttgctaaatct
atcgacattgaattaacacgtaactccattcaacctattatcgttactatgtcagaagat
ggcactgaattgacttcagaatttacattcagaaataatgaggatgtctctaggaattac
ggtaattttttgcttgaattgtctgaaaatgttcctgatgggctcattgtcttcatgcct
tcttatagcagaatggaggaatgggcaaggcaatggcaaaaggataagtatttggaataa
atttcaaaaaataaagtattacttatagaatcaaaggatgtaaatgagacatcataaaaa
ctatagtaatatcgtaagtgttgtgatgttggtagaggagctgcattattttcaattgca
agaggtaagattgcagaaggtatagattttgagggtcattatggaagatgtgttgctgtg
ataggatttccagccttgaacagtaaagacactttgattttagagagatgtaaattttta
gaagagaaatttaaaataacaaaaaatgattttatagaatttgatgctatgagataaaca
tgctaatgtttgggtagagttctaaggggtaagcaggattatggaattatgattatggca
gacaagagatttgcttagaagagtaaattatcaaaaatgccaagatggatttataaataa
ttagactaatctagatgcttaaatattactagtgagactgccatcactgtagttcgagat
ttctttagatagatggcacaaccttttaaaattgctgataatagttattttacataagac
acattgtga

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