Pseudomonas tolaasii: I7845_26875 Help Entry I7845_26875       CDS       T08975                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ptol  Pseudomonas tolaasii Pathway ptol03030   DNA replication ptol03410   Base excision repair ptol03420   Nucleotide excision repair ptol03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ptol00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     I7845_26875 (ligB)    03410 Base excision repair     I7845_26875 (ligB)    03420 Nucleotide excision repair     I7845_26875 (ligB)    03430 Mismatch repair     I7845_26875 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ptol03032]     I7845_26875 (ligB)    03400 DNA repair and recombination proteins [BR:ptol03400]     I7845_26875 (ligB) Enzymes [BR:ptol01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      I7845_26875 (ligB) DNA replication proteins [BR:ptol03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      I7845_26875 (ligB) DNA repair and recombination proteins [BR:ptol03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      I7845_26875 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      I7845_26875 (ligB)    MMR (mismatch excision repair)     DNA ligase      I7845_26875 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       I7845_26875 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden RNA_ligase HHH_2 DUF3701 HetR_C Motif Other DBs NCBI-ProteinID:  QXQ18454 Position 6018196..6019881 Genome browser AA seq 561 aa AA seqDB search MMRVLTALLLSALPCLAWAGNCPEEARSQVAHLAEQIRQWDDSYHRLGHSPVGDELYDQA RQRLAGWRECFPQAVNRADQPLASSRGTLPHPVAHTGLQKLLDEAAVADWLGSRQDVWVQ PKVDGVAVTLRYRRGRLSQVISRGDGLLGQDWSTAARKIPGIVQQLPEAIDLVLQGELYW RLDEHVQSANGGLNARSKVAGLMNRLQLSDTEAAGIGLFIWAWPDGPADFSERLATLARL GFTDSQRYSHAIQNITEAARWRTYWYNHPLPFASDGVVLHQARRAPAKRWQVSTPYWAVA WKYPAAKALALVSKVNFTIGRTGRITPILELEPVQLDDRHISRVSVGSLKRWQALDIRPG DQVSISLAGQVIPRLDQVILRNPNRVEVHEPDARAYHALSCWQLDPGCEEQMLSRLTWLS GNQGLALPHIGRETWNVLIQAGLIAGFLDWLTLDAAELANIDGFGERSRARVLEGIQSAR QRPFAQWLKALGVPPAARNNLEGDWQTLVAKDTQAWLAIDGIGPGRAAQLSAFFRDPHVQ ALAETLRVAGIDGFQARPDQQ NT seq 1686 nt NT seq  +upstreamnt  +downstreamnt atgatgcgtgtactgacagctcttttactcagcgccctgccatgcctggcgtgggccggc aattgtcccgaagaggcgcgctcccaagtggcccacctcgccgaacagatcaggcagtgg gatgacagctaccatcggctcggccactcccccgtcggcgacgaactctacgaccaggcc cgccaacgtcttgcgggctggcgcgaatgctttcctcaggcggtgaacagggccgaccag ccactggcgagctcacgaggcacgctaccgcacccggtcgcacacacgggcctgcaaaaa ctgctggatgaagccgccgtagccgactggcttggcagccggcaagatgtctgggttcaa cccaaggtcgacggggtggcggtgaccctgaggtatcgccggggtcgcttgagccaggtc atcagccggggcgacggcctgcttggccaggactggtcaaccgcggcgcgcaagattccc ggcatcgtccagcagttgcccgaagccatcgacttggtgctgcaaggcgaactctactgg cgcctcgacgaacatgtgcaatcggccaacggtgggctgaatgcccgcagcaaggtcgcc gggctgatgaaccgcctgcagttgagcgacacagaggccgcaggcattggcctgttcatc tgggcctggcccgacggcccggctgacttcagcgaacgcctcgccaccctcgcccgcctg ggcttcaccgacagccaacgctacagccacgccatccagaacatcaccgaagccgcacgc tggcgaacctactggtacaaccacccgttgccttttgccagtgatggcgtggtcctgcat caggccagacgtgcgcccgccaagcgctggcaggtcagcacgccttattgggccgtggcc tggaagtacccggcggccaaggcgttggcgctggtgagcaaggtaaatttcactatcggc cgcaccgggcgcatcacccccattctggaactggagccggtgcagctggatgaccggcat atcagccgcgtcagcgtcggctcgctcaaacgctggcaggcgctggatatccgccccggc gaccaggtgtccatcagccttgccgggcaggtgattccaaggctggatcaggtcatcctg cgcaaccccaaccgggttgaggtgcacgagcccgacgcgcgcgcctatcacgccttgagc tgctggcaactggacccgggctgcgaagaacaaatgctgtcgcgcctgacctggctcagc gggaaccagggcctggcgctgccacatatcgggcgcgagacctggaacgtattgatccag gccggtctaatcgcaggctttctcgattggttaaccctggatgcggcagagcttgctaac attgatggcttcggcgaacgcagccgtgcgcgggtgctcgaaggcattcaaagcgcccgg cagcgcccttttgcacaatggctcaaagccctgggcgtaccgcctgcggcccgtaacaat ctggagggtgactggcagacgctggtcgccaaagacacccaggcctggctggccattgat ggcatcggcccgggtcgcgcggcacaactgagtgctttttttcgcgacccgcacgttcag gccctggctgaaactttacgcgtggccggtatagacggttttcaagcccggcctgatcaa cagtaa

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