KEGG   Pan troglodytes (chimpanzee): 453096
Entry
453096            CDS       T01005                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    453096 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptr03400]
    453096 (TDP1)
DNA repair and recombination proteins [BR:ptr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     453096 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 453096
NCBI-ProteinID: XP_016781248
Ensembl: ENSPTRG00000006621
VGNC: 6768
UniProt: G2HG04 A0A2I3S171
Position
15:87959706..88049409
AA seq 608 aa
MSQEGDYGRWTISSSDESEEEKPKPDKPSTSSLPCARQGAANEPRYTCSEARKAAHKRKI
SPVKFSNTDSVLPPKRQKSGSQEDLGWCLSSSDDELQPEMPQRRAEKVVIKKEKDISAPN
DGTAQRTENHGPPACHRLKEEEDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGVKPKYNS
GALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHA
QAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSP
LYPRIADGTHKSGESPTHFKADLISYLMAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPG
RFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSIGSLGADESKWLCSEFKESM
LTLGKESKTPGKSSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKW
SAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELG
VLFLPSAFGLDSFKVKQKFFAGSQEPMATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDT
HGNMWVPS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggcgattatgggaggtggaccatatctagtagtgatgaaagtgaggaa
gaaaagccaaaaccagacaagccgtctacctcttctcttccctgtgccaggcaaggagca
gcaaatgagcccaggtacacctgttccgaggcccggaaagctgcacacaagaggaaaata
tcacctgtgaaattcagcaatacagattcagttttacctcccaaaaggcagaaaagcggt
tcccaggaggacctcggctggtgtctgtccagcagtgatgatgagctgcagccagaaatg
ccgcagaggcgggctgagaaagtggtgatcaaaaaggagaaagacatctctgctcccaat
gacggcactgcccaaagaactgaaaatcatggccctcccgcctgccacaggctcaaagag
gaggaagacgagtatgagacatcaggggagggccaggacatttgggacatgctggataaa
gggaaccccttccagttttacctcactagagtctctggagttaagccaaagtataactcc
ggagccctccacatcaaggatattttatctcctttatttgggacgcttgtttcttcagct
cagtttaactactgctttgatgtggactggctcgtaaaacagtatccaccagagttcagg
aagaagccaatcctgcttgtgcatggtgataagcgagaggctaaggctcacctccatgcc
caggccaagccttacgagaacatctctctctgccaggcaaagttggatattgcgtttgga
acacaccacacgaaaatgatgctgctgctctatgaagaaggcctccgggttgtcatacac
acctccaacctcatccatgctgactggcaccagaaaactcaaggaatatggttgagcccc
ttatacccacgaattgctgatggaacccacaaatctggagagtcgccaacacattttaaa
gctgatctcatcagttacttgatggcttataatgccccttctctcaaggagtggatagat
gtcattcacaagcacgatctctctgaaacgaatgtttatcttattggttcaaccccagga
cgctttcaaggaagtcaaaaagataattggggacattttagacttaagaagcttctgaaa
gaccatgcctcatccatgcctaacgcagagtcctggcctgtcgtaggtcagttttcaagc
attggctccttgggagccgatgaatcaaagtggttatgttctgagtttaaagagagcatg
ctgacactggggaaggaaagcaagactccaggaaaaagctctgttcctctttacttgatc
tatccttctgtggaaaatgtgcggaccagtttagaaggatatcctgctgggggctctctt
ccctatagcatccagacagctgaaaaacagaattggctgcattcctattttcacaaatgg
tcagctgagacttctggccgcagcaatgccatgccacatattaagacatatatgaggcct
tctccagacttcagtaaaattgcttggttccttgtcacaagcgcaaatctgtccaaggct
gcctggggagcattggagaagaatggcacccagctgatgatccgctcctacgagctcggg
gtccttttcctcccttcagcatttggtctagacagtttcaaagtgaaacagaagttcttt
gctggcagccaggagccaatggccacctttcctgtgccatatgatttgcctccagaactg
tatggaagtaaagatcggccatggatatggaacattccttatgtcaaagcaccggatacg
catgggaacatgtgggtgccctcctga

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (12)   
   UniProt (2)   
   RefSeq(pep) (10)   
DNA sequence (22)   
   RefSeq(nuc) (14)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system