KEGG   Puccinia triticina (wheat leaf rust): PtA15_18A87
Entry
PtA15_18A87       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PtA15_18A87
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrc03021]
    PtA15_18A87
   03019 Messenger RNA biogenesis [BR:ptrc03019]
    PtA15_18A87
Enzymes [BR:ptrc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     PtA15_18A87
Transcription machinery [BR:ptrc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     PtA15_18A87
Messenger RNA biogenesis [BR:ptrc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PtA15_18A87
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 77805939
NCBI-ProteinID: XP_053028586
Position
18A:complement(join(684662..685052,685160..685302,685364..685606))
AA seq 258 aa
MSSNDPRLRARLAAANATPPPPPPPPPSPPAGSARGSKVAEQGDGGPGPTTTTQNGKAEE
EREVRLTCRNFTFCVVCASNQNRSMEGHHVLAREAFKVTSAGTGSMVRLPGPAIDKPNVY
SFGTPYNDIYTANGILAMLDRNRKLKVAPERWQDSAVGGADVVITCEERCFDAVCDDLFS
RGGELNKPVHLINIEIKDNHEEASLAGKALLELCTAIEAAGDLDAELAAILERQMDRHPH
QLIHTGQSPSHPSLRRPL
NT seq 777 nt   +upstreamnt  +downstreamnt
atgtcttcgaatgacccgcgactacgagcccggctagcggcggcgaatgcaacgcctcct
cctcctccgccgccgccgccgtcacccccggctggatctgcgcggggatcgaaggtggcc
gagcagggtgatggtgggccggggccgacgacgacgactcagaacgggaaggcggaggag
gagcgagaggtgcggctgacgtgccggaacttcacgttctgtgtggtctgtgccagcaac
cagaatcggtcgatggagggccatcatgtgctggcgcgcgaagcgttcaaggtgacctcg
gcgggcacgggctcgatggtccgtctgcccgggccggcgatcgacaagccgaacgtgtac
tcgttcggcacgccgtacaacgacatatacacggccaacgggattcttgcgatgctcgac
cggaaccggaagctgaaggtggcgccggagcggtggcaggacagcgcggtgggcggtgcg
gatgtggtgattacctgtgaggagcgctgcttcgatgcggtctgcgacgacctgttcagc
cggggcggcgagctcaacaagcccgtccacctcatcaacatcgagatcaaggacaaccac
gaggaggccagcctggcggggaaggccctcctggagctgtgcacggccatcgaggccgcc
ggcgacctcgacgccgagctcgccgccatcctcgagcgccagatggaccgccacccccac
cagctcatccacaccggtcagtcgcccagccacccatccttgcgccgcccgctctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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