KEGG   Puccinia triticina (wheat leaf rust): PtA15_5A370
Entry
PtA15_5A370       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K08516  synaptobrevin homolog YKT6
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc04130  SNARE interactions in vesicular transport
ptrc04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    PtA15_5A370
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    PtA15_5A370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptrc04131]
    PtA15_5A370
Membrane trafficking [BR:ptrc04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    PtA15_5A370
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 77810019
NCBI-ProteinID: XP_053020352
Position
5A:join(3027328..3027382,3027467..3027524,3027627..3028008,3028120..3028236,3028314..3028334)
AA seq 210 aa
MKVLSIQILAIQKPHQPPAIPVAQASDLSSFGFLQRGSIGEFLNFFSKTVAERTASGQRQ
SVQENNYTAHAYLRPTENLIGIIITDDEYPVRVAFSLLNKLLDEFTTKIPEAKWKAAIAN
PSNSSSPPNLGFTAVDEYLVKYQDPKQADTILKVQQELDETKIVLHKTIESVLERGEKLD
SLVERSNALSSQSKMFYKTAKKQNSCCLIV
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaaagtcctctcgatacaaatcctggccatccaaaaaccgcaccagccacctgcaatc
ccggtcgctcaagcttctgatttatcttcatttggctttcttcaacggggaagcatcggc
gaatttttaaatttcttttcaaaaacagttgccgaaagaaccgcatcaggccaacgacaa
tcagtccaggagaacaactatacagcgcacgcctatcttcggccgaccgagaacctgata
ggcatcatcataaccgatgacgaatatcctgtccgagtagcgttctccttgttgaacaag
ttactagacgaattcaccacgaaaatccccgaagctaaatggaaagcagccatcgctaat
ccttccaattcgtcttcgccaccaaacctcggcttcactgcggtcgatgaatatttggtc
aagtatcaagaccccaagcaggctgatacgattttgaaagttcaacaagaactagatgaa
accaagatcgtgcttcacaaaacaatcgagtctgtattggaaagaggagagaaattggat
agcttggtcgaacgttcaaacgccttgagtagtcaatcgaaaatgttttacaagactgcc
aaaaaacaaaattcatgctgtctcattgtctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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