KEGG   Portunus trituberculatus (swimming crab): 123508302
Entry
123508302         CDS       T07853                                 
Name
(RefSeq) WD repeat-containing protein 43-like isoform X1
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    123508302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptru03009]
    123508302
Ribosome biogenesis [BR:ptru03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    123508302
SSDB
Motif
Pfam: Utp12 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_TEP1_2nd Beta-prop_WDR11_1st Beta-prop_WDR19_1st DUF5336 WD40_like Paf1
Other DBs
NCBI-GeneID: 123508302
NCBI-ProteinID: XP_045117824
Position
24:15610478..15626667
AA seq 669 aa
MNGKYYNFSPSGEKLSQVGPDGMVRVWDTATGVLDHEYQPASHLMAKPSCIRYSPQINEK
KTKKARGDEGSSVLAVATLQGTVLVYSPEKRELLATLDHSQPQAVVDLAWLNPSVLFTLS
ADNTLVKWNVFTGQKKECVEVKGGTSLCVLNVKNLCIAKSRIEHLFLKKAGGVKVKKNFT
GHTSQVAQLLPLSTESSPARYFLSCSTDDRYVYAWDTSSEGEEPVASFLVGGQVAGLEAV
EVQNNTISVAVTTLKGFLVLFTQHLNGHTNNTVVKRTGRLQILQEGKQEKVTVPIIAAHF
CGDLDHTLIVAYGNASMLKFERISVKEITGEKKLLRAAPAPSVSKKSALAKTVTPKVTRD
TTVVGPGHLTIAQADAPVRENKRKQGDEDGTLALPMDERLNALVLNKPTAATQVPKTDNQ
IHLLLQGLHSKDGRILQSILSCGDETMVANTVRRLPTPAVVPLLKHLRTLFMGKGHKNAA
FVTWVRLVLYHHMSHLSTLPNRQELLRPFYSISASRVATFMQLTELHARLDLSLTHVATK
HKDAKQAQVEPSALLIYREEDSDIDEDIEVPGVGVSESEDNWEELSDFGELNGHSDSDFD
EASQFRSSKRGLEKDDEEEEEEEEEEEEQEVEEIEDSEEEDSNEEDDESQSDMTVDANES
DSGNSDSDE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgaatgggaagtattataacttctccccttcaggggagaagttgagtcaagttggacca
gatgggatggtgagggtgtgggatactgccacaggtgtcctggaccatgagtaccagcca
gccagccacctcatggccaagccgtcatgtatccggtattccccacagatcaatgaaaag
aagacaaagaaggcgaggggagatgaggggagcagcgtcctggcagtggccaccctccag
ggcacagtgttggtgtacagcccagagaaaagggagctgctggccaccctggaccattca
cagccacaggccgtggtggacctggcgtggctcaacccctcggtgctgttcaccctgtca
gcagacaacaccttggtgaagtggaacgtgttcacggggcaaaagaaagagtgtgtggaa
gtgaagggcggaacttctctctgtgtgctgaatgtgaagaacttatgtattgccaagagc
aggattgagcacctctttctaaagaaggcgggaggagtgaaagttaagaagaatttcacc
ggccacacatcccaggtagcacagctcctcccactgtccacggagagcagccccgcccgc
tacttcctctcctgctccaccgatgacagatatgtttacgcctgggatacgagtagtgag
ggtgaggagccagtggcgagcttcttggtggggggccaggtggcggggctggaggcggtg
gaggtacagaacaacaccatatccgtggcagtgaccacccttaaaggcttcctggtcctg
ttcacccagcacctcaatgggcacacaaacaacacagtggtgaagaggacgggtaggtta
caaatcctgcaggaggggaagcaggagaaggtgaccgtacctatcatcgccgctcatttc
tgtggggacctcgatcacaccctcatcgtcgcctatgggaacgcatccatgctcaagttt
gaacggataagtgtgaaggagatcaccggggaaaagaagctcctccgagcagccccagcg
ccttcagtgtccaagaagtccgccctggcaaagactgtcacccctaaagtcactcgggac
accacagtggtcgggccgggacacctgacgatcgcccaagcagatgcaccagtacgggag
aacaagaggaaacagggggacgaggatggcaccctggccctccccatggacgagcggctc
aatgcactggtgctgaacaaacccaccgccgccacacaggtccccaagacagacaatcag
atacacttgttactgcagggtctacacagcaaagatggaaggattctgcagagtattctc
agctgtggggacgagaccatggtagccaacacagtgcgaagactgccgacacctgctgtg
gtgccgctcctcaagcacctccggactctctttatgggcaaaggacacaagaacgcagca
tttgtcacctgggtacggctagtcctgtaccaccacatgagccacctttccacgctaccc
aaccgccaggagctgctgcggccattctactccattagtgcctcccgcgtggccaccttc
atgcagctgacagagcttcacgcacggctggacctgtccctcacacacgtggccaccaag
cacaaggacgcaaagcaggcacaggtggagcccagtgcactgctcatctatagagaagag
gactcagacatagatgaagatattgaggttcctggtgttggtgtgtcagaatcagaggac
aactgggaggaactttcagactttggggagttgaatggccactcggattctgactttgat
gaggcgtcacagtttcgctcctccaaacgtggccttgaaaaagatgatgaagaggaggag
gaggaggaggaggaggaggaagaacaagaagtagaagagattgaggacagtgaggaagag
gatagcaatgaagaagacgatgaaagtcaaagtgatatgacagtggacgcgaacgaaagt
gacagtggcaatagtgatagtgatgagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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