KEGG   Portunus trituberculatus (swimming crab): 123510136
Entry
123510136         CDS       T07853                                 
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    123510136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptru04131]
    123510136
Membrane trafficking [BR:ptru04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    123510136
SSDB
Motif
Pfam: CNH Vps39_1 Clathrin TPR_Vps41 zf-Vps39_C
Other DBs
NCBI-GeneID: 123510136
NCBI-ProteinID: XP_045120911
Position
28:9499998..9513727
AA seq 866 aa
MALKAFDLVSVLGRVDLKIECLEASGSDLYLGSDESMVVHYLVEERTSESTGKIIYSTNR
MSQKNLGTRKAVTQLKTASALGRLMALSDGNLYLLDSDMLNTIGSGPKMKNVTVFCVNEN
PNTLDPFTVQLCVGKRRCIQFCSLHEDRVSFLRELSTHEPVNIAMDGNYVCVAGQGQYCV
FNVEAGTRQDLFPYDAATTYPHVKRIAKEEFLLAGPGNLGMFVTAAGISERPPIQWSEGI
TALSYYHPYIITITSQFIRVYSLIDQQHKQTINFSGGELVGNFDGQLYVAANSCVSCLMP
QPWTMQVEALMDSERVEEAVELAEHSGAVGMSQEQYQQLCRTLLQRAGFIKLVHGVFDQA
QEYFLKGAVDVREVISLFPGLLPAAVEFTRVQPPLHHLADINQAMQGDQARIKAAKTFLL
SFLLHLRFQGHLTHRMEVDTAIIKLQAEGDSSDLLLFLDHSDIACNLPECTQWLSDHKQF
SALAKLHRVLGNLEKSLDVLTKLVREEVTDKHFQGIKDLVDCLVLAMDASIVWRYADFVL
DRDASEGVRVFTETQTILDPSHVLHILQKYPEARLGFLHHLIDTKKLKDEKYHTELVLHY
VDEAVKLMNAGDADQRDTLNETRAKLQDLLSSSCHYQPHPVLTRLQGTNLHVEMAAVFGR
LGEHEKALSMLVHQLKDFSAAEQYCIAQSRVAASSSAKSNIFLKLLKIYLRPPPGGSEDD
IELAPAIELLSVHAEELEVSSVLALLPPTWSLAIIHHYLRAALRNSLHQSRIKRIQQTLL
RSENLQQKFVLYKLSKDMGPIPLAANRVCCVCNRGFTSCSFTIYPNGVMAHPSCAPNPSV
CPLTGTVFQAAHASPTSPAPAQQYRL
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggcactaaaggcttttgatttagtgtccgtgctgggcagagttgatttaaagattgag
tgtcttgaggcaagcggcagtgatctgtaccttggctcagatgaaagcatggtggttcac
tatctggtggaggagcggaccagcgaatccactggcaagatcatctactccaccaacagg
atgagtcagaagaaccttggaacaaggaaggcggtgacacaattgaagacggcctccgct
ctgggtcgcctgatggccctgagtgatgggaacctctacctcctggactctgacatgctc
aacaccatcggctcgggaccaaagatgaaaaacgtgactgtgttttgtgtcaatgagaac
ccaaacactctggatcccttcactgtgcagctatgcgtgggcaagaggagatgcattcag
ttctgctccctgcatgaggaccgtgtctccttcctgcgggaactctccactcatgagcca
gtcaacatagccatggatgggaactatgtgtgtgtggctggccaggggcagtactgtgtg
ttcaatgtggaggcaggaacacgtcaggacctgtttccctatgacgctgccactacttac
ccacatgtcaagaggatagctaaggaggagtttttgttagctggccctggtaatcttggt
atgtttgtgacagcagcaggcatctcagagcgtccacccatccagtggtcagaaggaatc
acagctctctcctactaccacccttacatcatcaccatcaccagccagttcatcagagtg
tacagcctgatagaccaacagcacaagcagaccattaacttctcaggcggggagttggtg
gggaactttgatggacagctgtatgtggcggccaactcctgtgtgtcctgcctcatgcca
cagccctggaccatgcaggtggaggccctgatggatagcgagagagtggaggaggctgtg
gagttagcagagcacagcggggcggtgggcatgagtcaggaacagtaccagcaactgtgt
cggaccctgctgcaacgtgccggcttcattaaactggtgcatggggtgtttgaccaggcg
caggagtatttcttaaagggcgccgtggatgtgagggaggtgatcagcttgttcccaggg
ttacttccagctgctgtagagttcacccgggtccagccaccactgcaccacctggcagac
atcaaccaggctatgcaaggggaccaggctaggatcaaggcagccaagacattcctgctc
tcctttctactgcaccttcgcttccaaggacacctcactcacaggatggaggtggacaca
gctatcatcaagctgcaggcggagggtgactcatcggacctgctgctgttcttggaccac
agcgacatagcgtgcaacctgccagagtgcacacagtggctgtccgaccacaagcagttc
tccgccctagctaagctgcacagagtattgggtaatcttgagaagtcccttgatgtgttg
accaagcttgtgagggaggaggtgacagacaaacacttccaaggcatcaaggatctggtg
gactgccttgttcttgccatggatgccagcatagtgtggcgatacgcagactttgtgctg
gaccgtgatgccagcgagggtgtgcgagtgttcacagagacacaaaccattctggacccc
tcccacgtactgcacatcctccagaagtacccagaggcgcggcttggcttcctccaccat
cttattgacaccaagaagctgaaggatgagaaataccacactgagctggtccttcattac
gtggatgaggcagtgaagctgatgaatgccggagacgctgaccagagagacacactgaac
gagaccagggccaagctacaagacctcctcagctcttcctgccactaccagcctcatcca
gtcctcactcgccttcagggaacaaacttacatgtggagatggcagcagtgtttggcagg
ctgggggagcatgagaaggcgctgtccatgttggttcatcagcttaaggactttagtgca
gccgagcagtactgtatagcccaaagcagagtggcggccagcagcagtgctaagtcaaac
atattcctcaagctgctgaagatataccttcgtcctcctcctggcggcagtgaggatgac
atagagttggcaccggcaatagagctactgtctgtacacgctgaggagctggaggtgtct
tctgtgctggccctgctgccccccacctggtcccttgccatcatccaccactacctccgt
gctgcccttaggaactcactccaccagagtcgcattaagagaatccagcaaactcttcta
cgtagcgagaaccttcagcagaaattcgtcctttacaaactctcaaaggacatggggcca
attcctcttgctgccaatagagtgtgctgtgtgtgcaaccgaggcttcaccagctgctcc
ttcaccatctaccctaatggtgtgatggcgcatccctcctgtgcaccaaaccctagcgtg
tgtcccctcactggtacagttttccaggcagcccacgccagccccacctcgcccgcccct
gcccagcagtacaggttgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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