KEGG   Photorhabdus thracensis: VY86_02465
Entry
VY86_02465        CDS       T03944                                 
Symbol
ribD
Name
(GenBank) 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ptt  Photorhabdus thracensis
Pathway
ptt00740  Riboflavin metabolism
ptt01100  Metabolic pathways
ptt01110  Biosynthesis of secondary metabolites
ptt01240  Biosynthesis of cofactors
ptt02024  Quorum sensing
Module
ptt_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ptt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VY86_02465 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VY86_02465 (ribD)
Enzymes [BR:ptt01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VY86_02465 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VY86_02465 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD DUF7595
Other DBs
NCBI-ProteinID: AKH65729
UniProt: A0A0F7LQZ6
Position
complement(612059..613147)
AA seq 362 aa
MTRAFELARQGCFTTSPNPNVGCVIVRDGQIVGEGFHLRSGELHAEVHALQMAGDKAKGA
TVYVTLEPCSHHGKTSPCADALIAAGVSRVVMAMQDPNPQVAGRGFYKLQQVGIEVEHGL
MMAAAESLNKGFLKRMRTGFPYVQLKMAASLDGRTALASGESKWITSSQARYDVQKFRAQ
CSAILSSSSTVLADDPSLTVRWNELDAETQAVYPEETLRQPVRVIVDSQNRVTSQHQVIQ
QPGHCWLVRTRADEYHWPENVEQILLPAHGAGVDLVLLMMQLGKRQINSVWAECGPLLAG
ALLTLGLVDELILYVAPKVLGDAACGLLTIPELKNLADAPEFDIFDVQQVGPDLRLCLRP
VY
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgacgcgtgctttcgagttggcgcgtcagggatgctttactacgtcacctaatcctaat
gtcggttgtgtgattgtgcgtgatgggcagattgtcggtgaaggttttcatttacgttct
ggtgagctacatgccgaagtccatgctttacagatggccggtgataaagctaaaggtgca
accgtttatgtcactcttgagccatgcagccatcatggtaaaacgtccccttgtgctgat
gccctgattgctgctggcgttagtcgtgtggttatggctatgcaggaccctaaccctcaa
gtagcgggaagagggttttataagttgcaacaggtggggattgaagtcgaacacggattg
atgatggcggcggcggaatccctcaataaggggtttctgaaacggatgcgtacagggttc
ccgtatgttcagttgaagatggcggcttctcttgacggacgaactgcgttggcttctgga
gaaagcaaatggattacatcatctcaggctcgttatgatgtgcaaaaattccgtgctcag
tgcagtgcgattctgagttccagcagtactgttctggctgatgatcctagcctgactgtt
cgctggaatgaactggatgcagaaactcaggcggtttatcctgaagaaacccttcgtcaa
ccagtgcgtgttattgttgacagtcagaaccgtgttacctcacagcatcaggtcatacaa
cagccgggccattgctggctggtccgtaccagagcggatgaatatcactggcctgaaaat
gtagagcagatactgttgcctgctcatggtgcgggtgtagatttagtgttactgatgatg
caattgggtaaacgtcagattaattctgtctgggccgaatgtggtccgctgttggcgggg
gcattactgactttggggttggtggatgagttgatactttacgttgcgccaaaagtgctg
ggcgacgctgcctgtggtttgttgactattcctgaacttaaaaatctggcggatgcgccg
gagtttgacatttttgatgtacagcaagtcgggccggatcttcgtctgtgcttgcggcct
gtatactga

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