KEGG   Photorhabdus thracensis: VY86_12820
Entry
VY86_12820        CDS       T03944                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ptt  Photorhabdus thracensis
Pathway
ptt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VY86_12820 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptt03019]
    VY86_12820 (groEL)
   03110 Chaperones and folding catalysts [BR:ptt03110]
    VY86_12820 (groEL)
   03029 Mitochondrial biogenesis [BR:ptt03029]
    VY86_12820 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptt04147]
    VY86_12820 (groEL)
Enzymes [BR:ptt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VY86_12820 (groEL)
Messenger RNA biogenesis [BR:ptt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VY86_12820 (groEL)
Chaperones and folding catalysts [BR:ptt03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VY86_12820 (groEL)
Mitochondrial biogenesis [BR:ptt03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VY86_12820 (groEL)
Exosome [BR:ptt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VY86_12820 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   VY86_12820 (groEL)
  Exosomal proteins of breast cancer cells
   VY86_12820 (groEL)
  Exosomal proteins of colorectal cancer cells
   VY86_12820 (groEL)
  Exosomal proteins of bladder cancer cells
   VY86_12820 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AKH64073
UniProt: A0A0F7LQ05
Position
2936144..2937790
AA seq 548 aa
MAAKDVKFGSDARVKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKKLSEPCSDSISIAQVGTISANSDETVGKLIAEAMKKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPENGSVELENPYVLLVDKKISNIRELLPVLEGV
AKASKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTSGIV
ISEEIGLELEKATLEDLGQAKRIVINKDTTTIIDGVGEKVAIDGRVSQIRQQIGESTSDY
DREKLQERLAKLAGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGVALV
RVAAAIAGLKGDNEDQNVGIRVAMRAMEAPLRQIVDNAGEEPSVIANNVKAGEGNYGYNA
TTEQYGNMIEMGILDPTKVTRSALQFAASIAGLMITTECMVTDLPKDDKADLGAAGGMGG
MGGMGGMM
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaatttggtagcgacgctcgcgttaagatgttacgtggtgtg
aatatccttgctgatgcagtaaaagtaaccctgggccctaaaggccgtaacgttgttttg
gataaatcttttggtgcgccttcaatcactaaagacggtgtttctgttgcccgtgaaatt
gaactggaagacaagttcgaaaacatgggggctcagatggtgaaagaagttgcctctaaa
gcgaatgatgctgcgggtgacggtacaaccactgcaactgtattggctcaatctattgtt
actgaaggtctgaaagccgtagccgctggcatgaacccaatggatttgaaacgcggtatt
gataaagcagtgattgccgcagttgcagaactgaaaaagctgtccgaaccctgctcagat
tccatctctattgctcaggtaggtactatctccgctaattccgacgaaactgtaggtaaa
ttgatcgcagaagcgatgaagaaagtcggtaaagaaggtgtaatcactgttgaagaaggt
acaggcctggaagatgaactggatgtcgttgaaggtatgcagttcgaccgtggctacctc
tctccttatttcatcaacaaaccagaaaacggttctgttgagttagaaaacccatatgtt
cttctggtagataaaaaaatctccaatatccgtgaactgttaccagttctggaaggcgta
gctaaggcaagtaagcctttgctgattgttgctgaagatgttgaaggcgaagcattggca
actctggttgttaacactatgcgtggcatcgtaaaagttgctgcggttaaagcgcctggc
ttcggtgaccgccgtaaagctatgttgcaggatatcgctgttctgactagcggtatcgtt
atctctgaggagatcggtctggaactggaaaaagccactctggaagatctgggtcaggca
aaacgtatcgttatcaacaaagataccacaactatcattgatggtgttggcgaaaaagtt
gcaattgatggccgtgtttctcagattcgtcagcagatcggagaatccacttctgattac
gaccgcgaaaaactgcaagagcgtttggctaaactggctggcggtgttgcagttatcaaa
gtgggcgctgcaacggaagttgagatgaaagaaaaacgtgcccgtgttgacgatgctctg
catgcaacccgtgcagcagtggaagaaggcgtagtagctggtggtggtgttgcactggtt
cgcgttgctgctgctattgctggcctgaaaggcgacaatgaagatcaaaacgtaggtatc
cgtgttgcgatgcgcgcaatggaagcacctttgcgtcagatcgttgacaacgcaggtgaa
gaaccatctgttatcgcaaacaacgtgaaagcaggtgaaggtaactatggttataatgcg
actactgaacagtatggcaatatgattgaaatgggtattctggacccaaccaaagtaacc
cgttctgcactgcaattcgcagcatctatcgctggtctgatgatcactactgaatgtatg
gtgactgacttgcctaaagatgataaagctgatttaggtgcagcaggcggtatgggtggc
atgggcggtatgggcggcatgatgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

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