KEGG   Quercus lobata (valley oak): 115975892
Entry
115975892         CDS       T07350                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115975892
Spliceosome [BR:qlo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    115975892
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    115975892
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 115975892
NCBI-ProteinID: XP_030952794
UniProt: A0A7N2QX14
Position
1:5531214..5543040
AA seq 828 aa
MARKYSSESSGRDESESSDYERRNRSKRDRESDRRSGKRNERRDERVDDDGDDKDRERVN
ERDVRDRDGRSGQRSERVERKESSEEEDGELVERDVGRREGERSRRYDEDDRRERERSRR
YDEDDRRERERARRYESEHRRRESEDGGRRRDRRERHDSEENGDEREGRRKSERRNDRTD
DYKHRRHRREDGDRDDKYRRDKEEVNEREKGNWGFREREDRDDKGFKDSKPQRQPRVQEV
DLNADNSKLGKSGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNAAN
VKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLLRRI
VLQLKRAYKRNDKPQLLAAVKFIAHLVNQLVAHEIIALELLTVLLENPTDSSVEVAVGFV
TECGSLLQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPDL
DLVEQEDQITHEISLQEEIDPEITLDIFKPDPNFLENEKRYEELKKTILGDESEDEEGSD
AASDDDEDDDEDEDDDEEEDEEQMKIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLK
IKLEPGQEMELNIMLLECCSQERTYLRYYGLLGQRFCMINKVYQENFDKCFVQQYSMIHR
LETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRL
LNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQE
QEASESESDNESDSSGSSVTGSASSESDPSSSDESERDDRHRKRRRRD
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggctaggaagtacagtagtgagtcgagtgggcgagacgagagcgaatcatctgattat
gagagaagaaatagaagtaaacgagatagggaatcagatagaagaagtggaaaacggaat
gagagacgcgatgagcgtgttgatgatgatggtgatgataaggatagggaaagagtgaat
gagagggatgttagggatagagatgggaggagtggacagcgtagtgaacgtgtagagagg
aaggagagttcggaggaagaagatggtgagttggtagagagggatgtggggaggcgagaa
ggggagagaagtcgtagatatgatgaagatgataggcgagaaagggagagaagtcgtaga
tatgatgaagatgataggcgagaaagggagagggcccgtcggtatgagagtgagcataga
cggagggagagtgaggatggtggtagaagaagggatcgacgtgagcggcatgattcagag
gagaatggtgatgagagggaagggcgtagaaaatcagagcgacgaaatgataggactgat
gattataagcataggaggcatagaagggaggatggtgatagagatgataagtataggaga
gataaggaggaggtgaatgaacgagaaaagggtaattggggttttagggagagagaggat
agagatgacaaggggtttaaagattcaaaacctcagagacagccgagagtgcaagaagtt
gatttaaatgctgataattcgaagttgggcaagagtggaggagtttacattcctccattt
aagttggctcggatgatgaaagaggttcaagataaaagcagtgttgaatatcagcggttg
acatgggatgcccttcggaagagtataaatgggcttgtgaacaaggttaatgctgccaat
gtaaagaatattattccagaactcttctcggagaatttgatacggggaagagggctattt
tgtcggtcctgtatgaaatctcagatggcatccccaggttttacagatgtgtttgcagca
ctggttgctgtagtcaacactaagtttcctgaggtgggcgagcttcttttgagaaggatt
gttttgcagcttaagagagcatataaacggaacgacaagcctcaattactagctgctgtt
aagtttattgcacatttagtgaaccaactagtggctcatgagatcatagccttggagctg
cttactgtgctgcttgagaatccaaccgattcaagtgttgaggttgctgttggctttgtc
acagagtgtggatcacttttgcaagatctctcacctaaaggcttgcatggaatatttgag
cgtttccgtgggattcttcatgaaggtgaaatagacaaaagggttcaatttctgatagaa
gggctatttgcgataagaaaagccaagtttcaggggtacccagctgttcgtccagatctg
gaccttgtagagcaggaagatcagataacccatgagatctctctccaagaggaaatagat
ccagagattacccttgatatattcaagccagatcctaatttccttgagaatgagaagcgt
tatgaggagttgaagaaaaccattttgggtgatgagtctgaggatgaagaaggttcagat
gcagcttcagatgatgatgaggatgatgatgaggatgaggatgatgatgaggaagaggat
gaggagcagatgaaaataagggatgaaacagagacaaatcttgtaaatcttcggaggaca
atctatctaacaattatgtccagtgtagattttgaggaggcaggtcataagctcctgaaa
attaaactagagccaggtcaagagatggagttgaacattatgctcttggaatgctgtagt
caggagagaacttacctccggtattatggtcttttggggcagcgattctgcatgatcaac
aaagtttatcaggaaaattttgacaaatgctttgtccaacaatattccatgattcaccgg
cttgaaacaaataagttgcgtaatgtggcgaagttttttgcgcatttactcggcacagat
gctttgccttggcatgttttagcctatattcgcctaacagaggaggacaccacttcttca
tctcgtatatttattaagattctattccaggaattgtcagagcatctgggcatccgtctg
ctgaatgagcgtcttaacgatcccacaatgcaggattcctttgaatctatcttcccaagg
gataatcccaagaacacacggttttcaattaatttcttcacatccattggacttggtggc
atcactgaaaacctacgtgagtacttgaagaatatgccacgccttattatgcaacaagag
caagaagcatcagaatccgaatcagacaacgaatctgatagctctggtagttcggttacg
gggtcagctagttcagaatcagatccatcaagttcagatgagagtgaaagggatgacaga
cacaggaagcggaggaggagagactaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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