KEGG   Quillaja saponaria (soapbark tree): O6P43_014906
Entry
O6P43_014906      CDS       T09778                                 
Name
(GenBank) pre-mRNA-splicing factor CWC22-like
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
qsa  Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_014906
Spliceosome [BR:qsa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    O6P43_014906
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    O6P43_014906
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-ProteinID: KAJ7965220
UniProt: A0AAD7LXK0
Position
6:18967138..18973758
AA seq 902 aa
MARKYSSESSEDDVKVGRDRYRRDSSSRKDSGLNSDRDLRDASDSSDSERRRTKRDYSRK
KDSISNSHRDHRDASDSSDSDKKVRNKRDYRRHELRNDDKDRERVTEKDVRDRYSRWQHE
HGEQRASQLENSDEDEKWVEKGTGRGGSKTSRQPDNGRRRRESATDRKGIKESYRSPDEN
DKRVEKDRRERDGRGRREFATDGHEVKESHRNSGEDYKCVEKDRREKERTYYSRTNREWS
PRHDSDVDDDRAVDKRSEQKSDRKADNKRRRHRSEEDGDDKEYQKDEDMSNHRDDSRIKE
DGRGRTLDETKPQRQSLVKENNLNPDASNLGKSGGVYIPPFKLARMMKEVQDKSSVEYQR
LTWDALRKSINGLVNKVNATNIKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFA
ALVAVVNTKFPEVGELLLRRIVLQLKRAYKRNDKHQLLAVVKFVAHLVNQQVAHEIIALE
LLTILLEEPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLI
EGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLSEEIDPEITLDIFKQDPNFPENEK
RYEELKKTILGDESEDDEGSDADSDDEEDDESEEEDEDEEQMKIKDETETNLVNLRRTIY
LTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKV
HQENFERCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSR
IFIKILFQELSEHLGIRLLNEHLSDPAMQDSFESIFPRDNPKNTRFSINFFTSIGLGGIT
ENLREYLKNMPRLIMQQQKPVSDTESDDESDSSDSSDSGSSSSESESESESDERRRKRRR
RR
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggccagaaagtacagtagtgagtccagtgaagatgatgttaaggttggaagagataga
taccgtcgtgacagtagtagtagaaaggattccgggttgaatagtgatcgtgatctcagg
gatgcaagtgattcctcagattcagagagaagaagaactaaaagagattatagtaggaaa
aaagactccatatcaaatagccaccgcgatcacagagatgccagtgattcctcagattca
gacaaaaaagtgagaaataagagagattatagaagacatgagcttagaaatgatgataag
gatagagagagagtgactgagaaggatgttagggatagatatagtaggtggcaacatgaa
catggggaacaaagagcatcccagctagaaaattctgatgaagatgagaagtgggtagag
aaaggaacaggcaggggaggaagcaagacaagccgtcagcctgataatggacgtagacgg
agagaatctgcaacagataggaaagggattaaggaatcttaccgaagccctgatgaaaat
gataagcgagtggaaaaagacaggcgagagcgagatggacgtggacggagagaatttgca
acagatggtcatgaggttaaagaatctcaccgcaattctggtgaagattacaagtgtgtg
gagaaagacagacgggaaaaagaaaggacttattacagccgtacaaatagagagtggagt
cctcgtcatgattcggatgttgatgatgatagggctgtggacaagagatcggaacaaaaa
agtgataggaaggctgataataaacgtaggaggcatagaagtgaagaggatggtgatgac
aaagagtatcagaaagatgaggatatgagcaaccaccgagacgacagtcggattaaagag
gatggacgtggcaggacacttgatgaaacaaaacctcaaaggcagtctttagtgaaggaa
aataacttgaatcctgatgcttcaaatttgggtaaaagtggaggagtttatattccccca
tttaagttggcccgcatgatgaaagaggttcaagacaaaagcagtgtggaatatcaacga
ttgacatgggatgctcttagaaagagtattaatggacttgttaacaaggttaatgctact
aatataaaaaatatcattccagaactcttttcagagaatttaatccgtggaaggggtctt
ttctgtcgttcatgtatgaagtcacagatggcatccccaggtttcactgatgtttttgct
gcattggttgctgttgtgaacaccaagttcccagaagtgggggagcttctgttgagaagg
attgttttgcaactgaagagagcttataagcggaacgataagcatcaactactagctgtg
gttaaatttgtagctcatctggtgaaccaacaagtagctcatgagattattgctttggaa
ttgctcactattctgctggaagagcctactgatgatagtgttgaagtagctgttggattt
gtcacggaatgtggatcaatactccaggatctctctcctaagggactacatggtatcttt
gagcgttttcgtggaattcttcacgaaggagaaatagacaaaagagttcagtttctgatt
gaaggcctatttgcaataagaaaagccaagtttcaggggtacccagcagttcgtcctgaa
ttggaccttgtagagcaggaagatcagttaactcatgagatatctctcagtgaggagatt
gacccagagattacccttgatatattcaaacaggaccctaatttcccggaaaatgagaag
cgttacgaagaattgaagaaaaccatacttggtgatgaatctgaggatgatgaaggctct
gatgcagattccgatgatgaggaagatgatgaatctgaggaagaggatgaggacgaggag
cagatgaaaataaaggatgaaactgaaacaaatcttgtgaatcttcgaagaacaatctat
ttgactattatgtccagtgttgattttgaggaggcaggtcataagcttctgaaaatcaaa
ctagagccaggtcaagagatggagttgtgcattatgctcctggaatgttgcagccaagag
agaacttacctccggtattatggccttctggggcagcgattctgcatgattaacaaagtt
caccaggagaattttgagagatgttttgttcagcagtactctatgatccacaggcttgag
acaaataaactccgtaatgtggcgaagttttttgctcatttacttggcacagatgctctt
ccttggcatgttttggcatacatacgtttgaccgaggaggatacaacttcctcttcccgt
atatttattaagattctcttccaggagctgtcagaacatcttggcatccggctgctaaat
gagcatctttctgatccagccatgcaggactcgtttgagtccatattccccagggataat
cctaagaatactcggttttccatcaactttttcacctctatcgggcttggcggcatcact
gagaatttacgggagtacttgaagaatatgccacgccttataatgcaacaacagaaaccc
gtttcggatactgaatctgatgatgaatcagacagttctgattcttcagattcaggaagt
tctagttcggagtccgagtccgagtctgagtctgatgaaagacggagaaagcgaagaagg
agaaggtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (4)   

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