KEGG   Quercus suber (cork oak): 112028217
Entry
112028217         CDS       T05868                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112028217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    112028217
Enzymes [BR:qsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     112028217
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     112028217
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 112028217
NCBI-ProteinID: XP_065617395
Position
Unknown
AA seq 1401 aa
MNVQAQAQAQDIVFTKQPYIEDVGPRKIQSMNFSTLSESEISRIAEVQVYKGQYYDAARI
PIEGGLLDPRMGPNKEGTCATCHGKFDSCPGHFGYIKLALPVYNVAYRDNIMNILKCICK
SCARILLVEDIRKEFLKKMRNPRLEALKKAELLKEIVKKCNSLTGSKKAFKCSRCGYINA
LVKKAGPPILGFNHERPNSNDGTMEEFRSAISHTKDSKTVFSAPTFNLDTVDVLALFKKM
VDEDCELLYLSDRPEKLIMENIAVPPVPIRPSVIMSGSQSNENDITERLKRIIQANASLR
QELLEASTASNRLAGWDVLQLEVAQYINSDVHVPLSMQASRPLGGFFQRLKGKQGRFRGN
LSGKRVEYTGRTVISPDPNLKITEVGIPIQMARILSYPERVSHHNIEKLRQRVSNGRDKY
PGAQVVINADGSKRIPVYGAKKQIADALRYGDIVHRHLEDGDIVLFNRQPSLHRMSIMCH
RARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGE
ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMVDGMDPVDLPTPAILKPIELWTGKQ
LFSVLVRPHASVRVYVNLTVKEKSYIKPNKEGEREKEAMCPNDGFVYFRNSELLSGQLGK
ATLGNGNKDGLFSVLLRDYKAHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPSKYLNER
RLETISRGYQGCHEKIKFYNEGSYSLKXGCDAAQTLEAEITRILNNIRDETGKVCMKELH
WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPAAKG
FVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRS
ASGCVVQFRYGDDGMDPAYMEGKNGAPLNFDRLFLKAKATCPAGGNACLSPSEVSERVES
RLSEDDMTPEGGCSVAFKNSFKCFLDEYVKSLTKTRETLESVESLAGEENSEIRERVIKN
ISGVTPKQLEVFLNTCISRYHLKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN
ITLGVPRIKEIINGAKKISTPIITAALKSDNNVNTARIVRGRIQKTNLGQVAKSIKLVMT
SRLASIIVTLDMERIRDVQLCIDANNVKESIIQAKIKVKNEHITVLDGGKLEIRSSETDR
SKMHFHLHSLKNALPTVIVKGLKSVERAIIKKEENKKMKTIKYGLLVEGSGLQDVMGIEG
VDGRKTTSNHVIEVQQTLGIEAARKCIIDEIKYTMESHGMNIDIRHMMLLADVMTFRGEV
LGITRFGIQKMGKSVLMLASFERTTDHLVNASVNGRVDRIEGVSECIIMGIPMQIGTGML
KVRQRVNLPSELHYGSDPILC
NT seq 4206 nt   +upstreamnt  +downstreamnt
atgaatgtgcaagcgcaagcgcaagcacaagacatagtcttcactaagcagccctacatc
gaagatgttggaccccgcaagatacaaagcatgaacttcagcacgttatccgaatcggag
atcagtagaatcgctgaggttcaagtatataaaggccagtattatgatgcagcaagaatt
cctatcgaaggcggcttattggatccacgaatgggcccaaataaggaaggcacatgtgca
acatgccatgggaaatttgatagttgtccggggcactttggatacataaaacttgccctc
ccagtttacaacgttgcatatagggataacattatgaacattttgaagtgcatttgtaag
tcatgtgctcgcatacttttggtggaggacatacgtaaagagtttttgaagaagatgagg
aatcctagattagaggctctgaagaaggccgaattactaaaagagattgtaaaaaagtgc
aatagcttgacaggttccaagaaagcatttaagtgctcaagatgcggatatataaatgct
ttggtgaagaaagctggtcctcctatcctgggctttaatcatgagcgtccaaactctaat
gatggaactatggaggaatttagatcagcaatctctcacacaaaagattctaagacagtc
ttcagtgcacctacttttaatcttgacactgtcgatgttcttgctctttttaaaaagatg
gtggatgaggattgtgagttgctttatctttctgatagaccagagaaactcatcatggaa
aacatcgccgtacctcctgtacctattcgtccttctgttataatgagtggatctcaaagc
aatgaaaatgacattacggagaggttaaagcgaattattcaggcaaatgctagccttcgt
caggagttattagaagcaagcactgcatccaatcgtctggctggttgggatgttcttcaa
cttgaggtcgctcagtatataaatagtgacgttcatgttccattatcaatgcaagcttcc
aggccattaggtggcttttttcagcgcctaaaggggaagcaggggcgatttcgtgggaat
ttgtcagggaagcgtgtcgaatatactggcaggactgttatatcacctgacccgaatctg
aaaattaccgaggttggaatccccatccaaatggctcgaatcttatcttatcctgaacgt
gtttctcaccacaatatagagaagttgaggcaacgtgtcagtaatggccgcgataagtac
cctggtgcacaagtggtcataaatgctgatgggagtaagaggatcccagtttatggtgct
aaaaagcaaattgctgatgcactgagatatggtgatatagttcaccgtcatttagaagat
ggggacattgtccttttcaacagacagccaagcttgcatcggatgtccatcatgtgtcat
agggcaagagttatgccttggagaacattgagattcaatgaatctgtgtgcaatccatat
aatgctgattttgatggtgatgagatgaatatgcatgtcccacaaacagaggaggctcga
acagaagctgttatgttgatgggggtgcaaaacaatttatgtacaccaaaaaatggagag
attttggttgcttccactcaagattttctaacgtcttcttttctcataacaaggaaggac
acgttttatgaccgtgcagctttttctcttatgtgttcttatatggtggatggcatggat
cctgttgatttgccaactcctgcaatacttaagccaatagaactttggactggcaagcaa
ttatttagtgttttagtgaggccacatgcaagtgtgagagtctatgtaaatcttactgta
aaggagaaaagctacatcaagcctaataaagaaggagaaagagaaaaagaagccatgtgc
cctaatgatgggtttgtctacttccgtaatagtgagctattatctggacagcttgggaaa
gccactttaggaaacggaaataaggatggacttttctctgttcttcttagagactacaaa
gcacatgctgctgctacatgcatgaatcgtctagctaaattgagtgcacggtggataggt
aaccatggtttctcaattgggattgatgatgtccaaccaagtaaatatttgaacgaaagg
agactggaaacaatctctagaggttatcaaggttgccatgagaaaataaagttttacaat
gaaggaagctacagcctgaaanccggatgtgatgctgctcaaacactagaggctgagata
actagaattttaaataatattcgagatgaaactggcaaggtctgcatgaaagaattacat
tggagaaatagtcctttgattatgtcccagtgcggttccaaaggatctcctatcaacatc
agccaaatgattgcttgtgttggccagcaatcagttgggggtcgtcgtgctcctaatggg
ttcatagatcggagccttcctcatttccctagaaaagcaaaaacacctgcagccaaaggc
tttgttgctaattctttctatagtggtttgacagccactgaattttttttccatacaatg
ggagggcgagaaggccttgtggatacggcggtaaaaacggctgacactggatacatgtca
cgaagattgataaaagcacttgaggacctatctatccattatgatgatacagtacggagt
gcaagtggatgtgtagttcaatttcgttatggagatgatggcatggatcctgcatatatg
gaaggaaaaaatggagctcctttgaattttgaccgattgtttttgaaagccaaggctaca
tgtcctgctggagggaatgcatgtctttctccttctgaagtgtctgaaagagtggaaagc
aggctttcagaggatgatatgactcctgagggtggttgttccgtggcatttaaaaattct
ttcaagtgtttcttggatgaatatgtaaaatctctaacaaaaacaagggagacgttggaa
tcagttgaaagtcttgctggagaggaaaattcagaaattcgggaaagagttatcaaaaat
atatctggagttacccctaaacagctagaggttttcttgaatacctgcatctctcgttat
catttaaaaaaaatagaagctggaactgcaattggagcaattggagctcaaagtattgga
gagccagggacgcagatgacacttaaaacttttcactttgctggagttgcaagcatgaac
attacacttggagttcctcgtatcaaagaaataataaatggagccaaaaagatcagtaca
cccatcatcactgcagcactcaagtctgataataacgtgaatactgcccgaattgtaaga
ggtcgaattcagaaaacaaatttaggccaggttgctaagagtataaaacttgtaatgact
tcaagattagcatcaataattgtcacacttgatatggagagaattcgagatgtacaattg
tgtattgatgctaataatgtgaaagaatcaattatacaagcaaaaatcaaagtgaagaac
gagcatattacggttttggatggtgggaagttggaaattcgttcttcagaaaccgataga
agtaaaatgcattttcatctccactctcttaaaaatgcacttccaacagttatagtaaag
ggtttaaaaagtgttgagcgtgccattattaagaaagaagaaaataaaaagatgaagaca
atcaagtatggtcttctggtagaaggctcgggtctccaagatgttatgggcattgaagga
gtagatggacgtaaaaccacaagtaatcatgtcattgaagtgcagcagacacttggcatt
gaagctgcaaggaagtgtattattgatgagataaaatatacaatggaaagtcatggaatg
aacatagacattcgccatatgatgcttttagcagatgtgatgacatttaggggtgaagtg
cttggaatcacaagatttggaatccaaaaaatgggcaagagtgtgttgatgctggcttca
tttgagaggacaacagatcaccttgtcaatgcttctgtaaatggtagggttgacaggatt
gaaggagtaagtgaatgcataatcatgggtataccaatgcagataggcactggaatgctc
aaagttagacaaagagttaatctaccttcggagctgcattatgggtcagatccaattcta
tgttga

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