KEGG   Raja brachyura (blonde ray): 145366294
Entry
145366294         CDS       T12046                                 
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
rbra  Raja brachyura (blonde ray)
Pathway
rbra04145  Phagocytosis
rbra04517  IgSF CAM signaling
rbra04540  Gap junction
rbra04814  Motor proteins
rbra05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rbra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    145366294 (tubb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    145366294 (tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    145366294 (tubb5)
  09142 Cell motility
   04814 Motor proteins
    145366294 (tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    145366294 (tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rbra03036]
    145366294 (tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rbra04812]
    145366294 (tubb5)
   04147 Exosome [BR:rbra04147]
    145366294 (tubb5)
Chromosome and associated proteins [BR:rbra03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     145366294 (tubb5)
Cytoskeleton proteins [BR:rbra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    145366294 (tubb5)
Exosome [BR:rbra04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   145366294 (tubb5)
  Exosomal proteins of colorectal cancer cells
   145366294 (tubb5)
  Exosomal proteins of bladder cancer cells
   145366294 (tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 145366294
NCBI-ProteinID: XP_080078496
Position
4:28422025..28432799
AA seq 450 aa
MREIVHIQAGQCGNQIGSKFWEVISEEHGIDPAGNYIGDSYLQLERINVYYTEAMSQKYV
PRAILLDLEPGTMDSVRSGNLGQLFKPDNFIFGQTGAGNNWAKGHYTEGAELVDSVMDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSSTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRTLSVSELTQQMFDAKNMM
AACDPRHGRYLTVATIFRGAMSMKEIDEQMLAVQSKNSSYFVEWIPNNVKVAVCDIPPCG
LKMSSTFIGNSTAIQELFKRISEQFAAMFRRKAFLHWFTGEGMDEMEFSEAESNMNDLVS
EYQQYQDATADENEYFEENEEEQDETQLSN
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgggagatcgtccacatccaggccggacagtgcggcaaccagatcggcagcaagttt
tgggaggtgatcagtgaggagcatggcattgaccccgcgggaaactacattggagactcg
tacctacagctggagcggatcaatgtgtactacaccgaggcgatgtcccagaagtacgtg
cccagagccatcctactggacctggagcccgggacaatggacagtgttcgttcggggaac
ttgggacaactcttcaaaccggacaacttcatattcggacaaacaggtgcggggaacaac
tgggccaagggacactacacggaaggggctgagctcgtggactcggtgatggacgtggtg
aggaaggaatgcgagaactgtgactgtctacaggggtttcagctcacccactcgctggga
ggaggcacaggctcgggaatggggactctgctgatcagcaagatacgcgaggagtacccg
gacaggatcatgaacaccttcagcgtcatgccgtcccctaaagtgtcggacacggtggtg
gagccctacaacgccaccttgtccgtccaccagctggtggagaacacggacgagacctac
tgcatcgacaacgaggccctctacgacatctgcttccgcaccctcaagctgaccacaccc
acctacggggacttgaaccacctggtctcgtccaccatgagtggcgtgaccacttccttg
aggttccccgggcagctcaacgcagacctgaggaagctggcggtcaacatggtgcccttc
ccgaggctgcacttcttcatgcccggctttgccccgctcactgcccggggaagccaacag
taccgcaccctctccgtctccgagctcacccagcagatgttcgacgccaagaacatgatg
gccgcctgcgaccctcgccacggccgctacctgaccgtggccaccatcttccgcggggcc
atgtccatgaaggagatcgacgagcagatgctggccgtccagagcaagaacagcagctac
ttcgtggagtggatccccaacaacgtgaaggtggccgtctgcgacatcccgccctgcgga
ctcaaaatgtcctccaccttcatcggcaacagcaccgccatccaggaactcttcaagcgg
atatcggagcagttcgcagccatgttccgcaggaaagccttcctgcactggttcaccggg
gaagggatggatgaaatggagttctcagaggcggagagcaacatgaacgacctggtatcc
gagtaccagcagtaccaagacgccacagcggacgagaacgaatactttgaggagaatgag
gaggaacaagatgagactcaattaagcaactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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